LOCUS       XM_039087020            3928 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 40S ribosomal protein S19-like
            (LOC120095010), transcript variant X1, mRNA.
ACCESSION   XM_039087020
VERSION     XM_039087020.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3928
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3928
                     /gene="LOC120095010"
                     /note="40S ribosomal protein S19-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 long SRA reads, 14 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120095010"
                     /db_xref="RGD:41050173"
     CDS             2276..2713
                     /gene="LOC120095010"
                     /codon_start=1
                     /product="40S ribosomal protein S19-like isoform X1"
                     /protein_id="XP_038942948.1"
                     /db_xref="GeneID:120095010"
                     /db_xref="RGD:41050173"
                     /translation="MPGVTVKDVNQREFVRALAAFLKKSGKLKVPEWVDTVKLAKHKE
                     LAPYDENWFYTGAASTARHLYLRGGAGVGSMTKIYGGQQRNCVRPSHFSRGSKSMARW
                     VFQALEGLKMVEKDQDGGRKLTPQGQRDRDRIAGQVAAANKKH"
ORIGIN      
        1 aaatacttgc aaaccaaatc caagaacacc tcaaaaagat catctaccat gatcaagtag
       61 gcttcatctc agagattcag gattgttcaa tgtataaaaa ccaggaaata taattcacca
      121 tataagtaaa ctgaaaaaaa aaaccacata atcatctcat tagatgcaga aaaaggcctt
      181 ttgccaaaat ccaaaagtcc tttatgatag aagtcttgga gagattgggg atacaatgga
      241 catagctaaa tataataaag gcaattaaca ataaaccttt agccaacagt ttaaatggag
      301 agaaactcaa agcagctcca ctaaaatcag gaatgagaca aggttgtcta ctctctccat
      361 atctactcag tgtagcactt aaagttttag ttaaagcaag aagacaactg aagaaaatca
      421 agacatacaa attggaaagg aaaaaagtca aagtatcatt atttgcagat aatatgatag
      481 tacacataag taaccttgaa attctaccag gaaattccta taaaagcagc acgatattgg
      541 cataaaacat aaatgttgat caatgaaatc aaattgaaga cctagacata aatccatata
      601 cttaatggac accatttttt aaaaaggaag acaaaaatac tcactggaaa aaaagacagc
      661 atcttttaaa aatggtgttg gtcaaaatga ttggctgcat atagaagaat gcaaatagat
      721 ccatatcaat caaccagcac aaaactcaac tttaaataga acaaagatct cagcataaaa
      781 ctaggtgcac tgaacatgac agaatagaaa atggggaata gccttgaact cattggcaca
      841 ggagaagact tgctgagctg acagaatacc attaacacaa gcactaggat tgacaatgaa
      901 taaatgggac ctcataaaac tgagaagctt ttgcatggca aagggcacat caatagaaca
      961 aagctgaagc ctacggattc agaaaagatt tttaccaagt tcacatccag tagaggacta
     1021 gtattcaaaa tatataaaga actcaagaaa ctagatattt aaaaaacaaa tattttaatt
     1081 taaaaatggg gtacagatct aattagagga atctcaaatg accaagaagc atttaaagaa
     1141 atgcttgatg ttctcagcca tcagggaaat gcaaatcaaa atgaccctgg gatgccatct
     1201 tatacctttt ggggtagcta agattagtaa cacaagtgac agctcatgct ggtgaggatg
     1261 tggagcaaac aaacactcct ccattgttgg taggaatgca aacttgtgaa accactctgg
     1321 aaatcaatgt ggtagtttct cagaaaattg ggaattgatc tacctctaga cccagctata
     1381 ctccaacctt ccaaaaggag acttgctcaa ccatgttcat tgtgccttta ttcataataa
     1441 tcagaagctg gaaacaacct agatgtccct caaagaatgg ataaataaaa tggtttacaa
     1501 aatgataaac aaaacagtga tacatttaca cattggagta ttacaaaata gttaaagttt
     1561 tttaatggca tcatgaacct tgcaggcaaa tgaataaaac tagaaaaaaa tcaacttgga
     1621 caaggtaacc aagacacatg aagataaata ttgtatgtag tcacttataa gtgaatatta
     1681 gccatttaat aaatgatata accaagctac aatctatgga cccagagcgg ttaggtaaaa
     1741 aggaggggtc caggtgggac acatgcatct cccaaggaag ggaaagcagg atagacttta
     1801 tgggtgaacc gtaagcagat ggtccaggac agcccaggtc aggggagagt gatggaggga
     1861 gagagtacag gtagagacag ctgctactgc ggacatttag ggagtgttgt agaaacttca
     1921 tgacatccat gaagctggtc ttaatgagaa ctcctagtaa tggagtatac aaactctcag
     1981 ctggccacac cctgtagtcc ggcaaggtat caggtggtag atctaggttg tgttcatttg
     2041 gggtgttagc caagggggtc ccatgaaaat ctccccacag tccagacgga tgctaaaaca
     2101 aaaggttggt ctctgcaaac tgacagcagg ggttccattg ccaaggacag catccacaca
     2161 attcattaac catggaaaag taaagtttgt gcgtacatgg agccttcttc cctaaggtat
     2221 agccctttga ttaaggaagg tactttcccc tggctggcag cgcggaggcc gcaggatgcc
     2281 tggagttact gtaaaagacg ttaaccagcg ggagttcgtc agagctctgg cagccttcct
     2341 caaaaagtct gggaagctga aagtcccaga atgggtggac acagtcaagc tggccaaaca
     2401 taaagagctt gccccatatg atgagaactg gttctacaca ggagctgctt ccacagcacg
     2461 gcacctgtac ctccgtggtg gtgcgggggt tggttccatg accaagatct acggaggaca
     2521 gcaaagaaac tgtgtcaggc ccagccactt cagcagaggc tctaagagta tggcccgctg
     2581 ggtcttccaa gccctggagg ggctgaaaat ggtggaaaag gaccaagatg ggggccgcaa
     2641 gctaacacct cagggacaga gagatcggga cagaatcgct ggacaggtgg cagctgccaa
     2701 caagaagcat tagaacaaag aatgctgggt taataaattg cctcattcat taaagaaaaa
     2761 aaagggaagg tactttccaa gctaccaaaa gaaagacaca gacaccgacc cagtcacaac
     2821 acctttcact tacaatctct cctgcctgca aaatatgcta gggcaatggt gacacagaac
     2881 ttgtgagagg aactcaccaa tgcaatgtct catttaattt aaggtccgct ccatgtgaag
     2941 gaacccatac tggccactac ttgaatgacc aagaactaga aactagatag ttcagagacc
     3001 taaggtaaaa tcaaatgcta ctggtcttaa agacaaacaa acatttaaca acaacaaagg
     3061 attcctaatg atattctgct atactcacag ccttatcccg tcatcagagg cttcctccag
     3121 cagcagatgc gaacaagtgt gaagacccac agccagacat tactcggaga gagggaatcc
     3181 catgggaggg aaggtggaag actagaagag tctgagggta tagaggacag caggagaaca
     3241 aggccctctg aaccaactaa gcaaggtaca tatgagctca cggagacgga tgcagcaagc
     3301 acagggccta caagagtcta cacagaccag gtcctctgca ctagcaatta gcttagtatt
     3361 tatgtgggac tcctaactat gagaatgagt gggtctctga ctcctgctcc tgctcttagg
     3421 tcccctttcc tcctgttggg ttgccgtgta caaacgatat gaaaggtctt gcttcatctt
     3481 actataattg tcatatttgg ttcttatctc ttaaaagcct attcttttct aatgaaagac
     3541 agaaagggag tggatctgga gaggagggaa agtgggagaa gaaactttaa taagaatata
     3601 ttatatgaga aaagactcta ttttcaataa atgttttaat gattagctaa agattatttt
     3661 caactaatac ccagcccatt ttacaaactt gcacagataa cttcaagcta caacaggctt
     3721 tcccttccac tcctgatgat aagtggtgaa cagtgaacag tcacaaaaat ataactaatg
     3781 ctggcaatga tttaggggga agaaaagtcc taaatatccc tgatgggaat ggaaattaat
     3841 ccagccacca tgaaaatcag tagaaaggtt cctcaaaaaa cttccgggta catgcccaca
     3901 ggaatcatac ctagccaact ggcacatc
//
