LOCUS       XM_039084948            2677 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 431-like
            (LOC120094817), transcript variant X1, mRNA.
ACCESSION   XM_039084948
VERSION     XM_039084948.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084948.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2677
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2677
                     /gene="LOC120094817"
                     /note="zinc finger protein 431-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 2 long SRA reads, 6 Proteins, and 96% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 147 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:120094817"
                     /db_xref="RGD:41177170"
     CDS             287..1456
                     /gene="LOC120094817"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038940876.1"
                     /db_xref="GeneID:120094817"
                     /db_xref="RGD:41177170"
                     /translation="MLRQAPQLRHGEHIVTANKGDALTYDDVHVNFTREEWALLDPSQ
                     KSLYKDVMQETYRNLTAIGYNWEDHTIEEHCQSFRRHGRHERCHTGEKPSEYTQCGIA
                     FAQHSHLQRHNSTHTGEKLCECKPRDKAFTYDSQLQTLERIHTEEKSYKCNKCGKAFE
                     RRCNLGRHKLIHTGRKSYKCNLCGKAFARHSHLKRHGRTHTGEKPYECDQCGKAFASH
                     SYLQVHKRIHTGEKPYECDWCGKAFIRCSHLQVHKRIHTGEKPYECNQCGKAFASHSY
                     LQVHKRIHTGEKPYECGWCGKAFIRCSHLQVHKRIHTGEKPYVCDRCGKDFVVQNDLR
                     KHKRTHTGEKPYKCNECGKAFVCNASLRTHKATHTTVKPYEYKKFSKFFASHDQL"
ORIGIN      
        1 tgctactgaa atgcaaatct gtagatctgg aaatggtctg gccctgggct tgaagcttag
       61 gccgagaact gtgtatcctt actgtatctt cagctcactc taacccttat ggaggttctc
      121 aagtcactca agacgactgg ccaatcagat ccttcaatgg acctgccaat cagaagagaa
      181 ggcgggcttt tccgggtgtc ttgttgcagg attcgctttg ccgctaagcc ttcttaaatg
      241 gtcctggctg ctgtgctttg tgtcctgcgg ttggattctg tgcggcatgc tcaggcaagc
      301 tccacagttg cgacatggtg agcacattgt cacggcaaac aaaggggatg cattgaccta
      361 tgatgatgta catgtgaact tcacccgaga agaatgggct ttgctggatc cttcacagaa
      421 gagtctctac aaagatgtga tgcaggagac ctacaggaac ctcactgcta taggttacaa
      481 ttgggaagac catactattg aagaacattg tcaaagtttc agaagacatg gaaggcatga
      541 aagatgtcat acaggagaga agccctccga atatactcag tgtggtatag cctttgcaca
      601 acatagtcat ctccaaagac ataatagcac acatactgga gagaaactct gtgaatgtaa
      661 gccacgtgat aaagccttta catacgattc tcagcttcaa actcttgaaa ggattcatac
      721 tgaagaaaaa tcctacaaat gtaataaatg tggtaaagcc tttgaacgtc gttgtaatct
      781 tggaaggcat aaactaatac atactggaag aaaatcctac aaatgcaatc tgtgtggtaa
      841 agcatttgca cgacacagtc atctcaaaag gcatggaaga acacatactg gagagaaacc
      901 ttacgaatgt gatcaatgtg gtaaagcctt tgcatctcat agttatctcc aagtacataa
      961 aagaatacat actggagaga agccctatga atgtgattgg tgtggtaaag cctttatacg
     1021 ttgtagtcat ctccaagtac ataagagaat acatactgga gagaagccct atgaatgtaa
     1081 tcaatgtggt aaagcctttg catctcatag ttatctccaa gtacataaaa gaatacatac
     1141 tggagagaag ccctatgagt gtggttggtg tggtaaagcc tttatacgtt gtagtcatct
     1201 ccaagtacat aagagaatac ataccggaga gaagccctat gtatgtgatc ggtgtggtaa
     1261 agactttgta gttcagaatg atcttagaaa acataaaaga acacatactg gagagaaacc
     1321 ttacaaatgt aatgaatgtg gtaaagcctt tgtatgtaac gctagtctcc gaacacataa
     1381 agcaacacat actacagtga aaccttatga atataagaaa tttagtaagt tctttgcctc
     1441 tcatgatcaa ctttgacaac atgaaagaat tgatactgta gagaaacctc acaaatgtag
     1501 tcaatgttgt aaagcctttt cacgatcaag ccatctccaa ctacataaaa gaacacatac
     1561 atactgaaga gtaaccctat gaattcaacc aatgtagtaa agcctttact gtgatcttca
     1621 aaggtatggt ggtttaaata tacttggccc atggcaagtg gcagtgttag gaggtatggc
     1681 ctttttggag tagatgtggc ctttgaggaa gtatgtcact gtggaggggg gatgggcttt
     1741 gagaccccat gcttaaactc tgcccagggc agaagaatct tctggctgcc ttctgatcaa
     1801 gatgtagaac tgtcctccag caccatgtct gcttggtgac agacattcct tccaccttga
     1861 taatagactg aacctctgaa tctgtatacc tcccctcccc ccaattaaat atcctttcta
     1921 agtgttgcct tggtcatggt atcttttcac agcattaaaa cccaaattaa cacaaacagc
     1981 ataaaagata ccacactaga gagaaactat gaatgtacta aatatggtga agcctttgca
     2041 catttctata tctccttata acaaaagtat tcctgaaacc ctgtgaatgc agaaaataac
     2101 attcttgaga aaagccttat aaatgggctc agtgcggtaa agtctttgtg aaatctgcat
     2161 aaatacctaa caattcaaaa acatggtcaa agtaaatgcc aggagtctat tggaaacgag
     2221 ctgagttaga agggtaggga ttatgaatag tgtggttggg tgtgcagtta gtgctagaaa
     2281 gttagggctt agggttaaag tgttgagggg gcggtgtggg ttaaggttag ggactggacg
     2341 ggtagggtta ggttgtcgtt tagttttagg gggttaggaa aaagtgtgaa tttggggaag
     2401 gaaatgggag gaggttggct gtggtacagg gagggatgaa aatgatatat agtattcata
     2461 aaatcctcaa ttacaaaaac aatcaagttg aaaagcttca acttaaatag attgaggggt
     2521 aaggacactt gttactacat taatgaaatt cagaaaaatc attaggtctt atcttagaaa
     2581 tcatttattc caataaagtg gaaaactcta aaataaagca catagatttc tggatgtata
     2641 taacctaaca aaagtaaatt gtgaagatct aaaaaaa
//
