LOCUS       XM_039082855            2663 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 40S ribosomal protein S16-like
            (LOC120094351), transcript variant X2, mRNA.
ACCESSION   XM_039082855
VERSION     XM_039082855.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2663
                     /gene="LOC120094351"
                     /note="40S ribosomal protein S16-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 44 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120094351"
                     /db_xref="RGD:41306037"
     CDS             179..619
                     /gene="LOC120094351"
                     /codon_start=1
                     /product="40S ribosomal protein S16-like isoform X2"
                     /protein_id="XP_038938783.1"
                     /db_xref="GeneID:120094351"
                     /db_xref="RGD:41306037"
                     /translation="MVSKGPLQSVQVFGCKKTATAVAHCKRGNGLIKVNGRPLEMIEP
                     RTLQYKLLEPVLLLGKERFPGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYRKYVDE
                     ASKKEIKDILIQYDRALLVADSCHWESKKFGGPGAGAWYQKSYP"
ORIGIN      
        1 cttgtttaaa aggcaatgtc cttgctatag agatgtttca ctcagcaaag cgcttgcttg
       61 ctgtgtaagc ataaagaccc gcgtttggat ccccattaaa acaagcaaac aggccccaag
      121 ctttcctttt ccggtggtgg ccccgcgggg tgaggagctc gtgttcatac ttgtagctat
      181 ggtgtccaag ggtccgctgc agtccgtgca agtcttcgga tgcaagaaaa cagccacagc
      241 tgtggcccac tgcaaacgag gaaatgggct catcaaggtg aatggccgtc ccctggagat
      301 gatcgagccg cgcactctac agtacaagtt actggagcct gttttgcttc tgggcaagga
      361 gagatttcct ggtgtggata tccgggtccg tgtgaagggt ggtggtcatg tggcccaaat
      421 ttatgctatc cggcagtcca tctcaaaagc tctggtggct tattaccgaa aatatgttga
      481 tgaagcctct aagaaggaga tcaaagatat cctcatccag tacgatcggg ccctgcttgt
      541 agctgactcc tgtcactggg aatccaaaaa gtttggcggt cccggtgccg gtgcctggta
      601 ccagaaatcc tacccataag ccagtctcaa ggatcagggt ttacctttgt aataaacatc
      661 ctagggcttt aaaacaaaaa acaaaaaaca agcaaacaaa gaaaaatcta gactcggagg
      721 tgcctgtctg taatcccatc atggggacat ggagggaaga ggatccgtgg gctaactagc
      781 ttgtctcctt gcatctgtga tcgcgaggtt cagtgaggga ccctgtctca gtaaacgagg
      841 tagacagtga tggagccctc tgctctccac acagacattc acccccatct gcacacacac
      901 gtgcatgtgg ctgtgtgtgc attgccactc ggcattcaag cacatacaca attttaaaga
      961 aaacatgttt tacttaaaac ttggttataa aaacatcctt accaattttg aaagtttcct
     1021 gtttgtttgc ttgtttgttt gttcacgggc caatatcaag tgtgccctgg ttctgtcggc
     1081 attgttttct ttgtaaccta tcatcaccct gaagtgctaa ttcaaaaagg ttaaacaatt
     1141 ccctcagcag ctcctaaatt ttaaatatga aaagaattcc atagcctttt cgtcttcttc
     1201 ttcttcttct tcttcttctt cttcttcttc ttcttcttct tcttcttctt cttcttcttc
     1261 ttcttcttct tcttcttctt gtgtttgagg ataaagcagc acatatctct attgtccctc
     1321 ccctgagcaa ttgttatcca gattcttgat gtgcagggaa cagttctgag aaacgcattg
     1381 atgtttattt gaactccatg gtgccctcgt atccgcgcgt cactgatgtt aacataaatc
     1441 ttggttaact tacaatgcac gagaccctga actggtgtca tctggttccc atatttagtc
     1501 caaccttcat cccagatccc gagagcaccc tggagaactg ggtgatcgat cacaagtcca
     1561 tttccttcct tcgaagtccc aggagtgctg ggctggggat gggttcctga tgctggggga
     1621 cacatgtgca tgtgcatggg ctgagcatgg gatgtgcact gtgcagtagt cctcaccatg
     1681 cactttgcat gtgctctccg cagttcccac tagcacattt cagtaacgtg tatgaacgct
     1741 atggcaaaac agcgattttc tcgttccagg gttagctgct tttctcattt ggcaaaacac
     1801 accttttcac agccgctatg ctaaacttca agaataaacc agcggcctga acaggatttg
     1861 ccattaatct taaggttgac agtgtcatgt gaaactcggt gtgttatagt gattttctcg
     1921 tggacatcca actccagatc ccttagtccc tcttctaacc caataggagc ctggcagttc
     1981 ctcctgaacc ttttgactgt ttttacattt attaatgtgc acacccaccc acaccacagt
     2041 gcaacactgc gtcaaaggac tctggccacc gtgtgtccct cctatggctt tccgtaagtt
     2101 cctgtatccc ttcccctgtt gccagccaca agtttatgat tcttaaggct ggccctggac
     2161 tgagcctcgg tggtcctgtc agttccagca tgctcctcac ggggcccatg ctgtgaaaac
     2221 ctgacagaga gatccaggct acaagcctag ctgataggta tcttcaaaca gccaatccag
     2281 tagacgcctg ggtttctgct ggcgtcaaac cagaggcagc tgtgccaaca ggtgcctcag
     2341 tgtttcctgg ctctgctttc aaagccaaac cccagacagc ggcggcttca tcaactgatt
     2401 cagcagccac gaggaccagc attggcctct tccaccatat ttaaagaaag ttcccccagc
     2461 tgctgagata gctccacaga taaaggtgct tgcagccaag cctgagggcc agagccggaa
     2521 cccacatggg agaaggtgag agctgactcc ttcaagctgt cctttgactt ccatacatgt
     2581 gccatggctc acacacacac acacacacac acacacacac acacacacac tcacatgtac
     2641 acacacgcac acacacacac tac
//
