LOCUS       XM_039082779            3436 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NADH dehydrogenase [ubiquinone] 1 beta
            subcomplex subunit 4-like (LOC120094308), mRNA.
ACCESSION   XM_039082779
VERSION     XM_039082779.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082779.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3436
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3436
                     /gene="LOC120094308"
                     /note="NADH dehydrogenase [ubiquinone] 1 beta subcomplex
                     subunit 4-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 long SRA read, 6
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120094308"
                     /db_xref="RGD:40961805"
     CDS             1168..1557
                     /gene="LOC120094308"
                     /codon_start=1
                     /product="NADH dehydrogenase [ubiquinone] 1 beta
                     subcomplex subunit 4-like"
                     /protein_id="XP_038938707.1"
                     /db_xref="GeneID:120094308"
                     /db_xref="RGD:40961805"
                     /translation="MSFSKYKPAPLATLPSTLNPAEYDVSPETRKAQVERMSIRARLE
                     REYLLQYNNPKRQTHIEDPALIRWTYARSANVYPNFRPTPKNSLLGAVAGLRPLIFWY
                     YVIKTDRDRKERVIQEGKLDRKFSISY"
ORIGIN      
        1 cgggagtcat tgaacccaag catcattgtt cagtcacaga gatgacaatg tgtgacattg
       61 aaaggtggtg agtagaattt tcttatttct gtaaagattg tgaggagttt ctggctaccc
      121 taaaggtagt cttgtgggta gtaaggactc ttttctcaat atgacaaaat aacgttgaca
      181 atgacagtta gcaagccatt gttcctgtta gtaagtcaca gaaaagactc tatctgcttt
      241 gtaatgcagt taatgttgtg atgtggagct aaagacacca ggcaggagga aggaagcatc
      301 tgggattccc ttttcatgaa gttaaaaatc acctgatcta tctaaggtca gaatgatcct
      361 cacagggtag caagatagag ggctccttcc tgggccatat ggagggtaca ttccttatca
      421 ccagatcttc atggtggttt tataattcta tgcaaatcag aattggaaaa gctatacaaa
      481 taagatataa gccctcaatt aaaactacaa ttaaaaatat attcataata aaacattttt
      541 tacataaggt ctcactattt agacctaact gccctggagc tcactatgca gagtgggcta
      601 acctcttact caaagactaa aggtgtccca ttttgcctat ccaataaaca aaatttaaga
      661 gcacaagtaa attactgtgc tacaatattg agaaaacatt accaaaaaaa ataaaaaaaa
      721 aacaacaaaa aaaaaaaaaa caccagatgc taaaatggta tgtgtgtgag aacagtttta
      781 aaaggttcat gggaaagggt aagtattaaa atgtatttaa aaggctagtt ttttaaatta
      841 tgagaatatg gctagttttt cttatttttg tttccatcta ctacatataa taagcatagt
      901 tgatgttata attagacatt tgtcttgtgg gtccatgaac ctacatgtgc acatgtggag
      961 gccagagctc aaattagtca tctccctcta tcatttttca ccttagtttt tgagagagca
     1021 tctttcactg gactgaaagc tctctaattg ttagtctggc tagtggtcct ctaggatcct
     1081 cctgtctctg tccctcagga ctgggattat aggtatgcac taccacattt aacttttttc
     1141 tttaaaaaaa aatctggggg agccaagatg tcgttttcca agtataagcc tgcacccctg
     1201 gccactctcc ccagtaccct caaccctgcc gagtatgacg tgtctccgga gacccgaaag
     1261 gcgcaggtcg agcgcatgag cataagggcc cggcttgaac gggagtatct gcttcagtac
     1321 aacaacccca aacgccaaac gcacatcgaa gatcctgcct tgattcgttg gacctatgca
     1381 agatcagcaa atgtttatcc taatttcaga cccactccca agaactcact cttaggagcg
     1441 gtggcaggtt taagacctct catcttctgg tattatgtta tcaaaacaga cagggacaga
     1501 aaagaaagag ttatccaaga aggaaaactg gacagaaaat ttagcatctc ctactaagct
     1561 cggcaaggat gcctctgttc ttgcatcaat aaatctccta ttgattaatc actgaaaaaa
     1621 aatctgaatg ctggggatcc aaactcaggt cctcatactt tcacagtaag cagtttaccc
     1681 actgagctgt ttcccaaatc ctagatactt tgttttttta agattcattt gctgttttca
     1741 cagctcattt tactactgat aaggacttag aatgaagttg ctgtgtcctc atattcttgt
     1801 tgagttccct tgagctcaaa gggaagattg gcatctccct atttgtcaag aatgctctgc
     1861 atattggttc agtgatactg ttggcaatga gagcaaatca aggagaggga cattaataca
     1921 atgactagag atagggaact tgctcaaaga cttactggtg tcccagaaga gatggcttga
     1981 gatactccat atgggcattg agtctagagt gacgaactaa ccataagcat tactttgttg
     2041 aagtctaatt acaacataga tgagaacgaa gtcatgcaaa ctaggatgga caaagcagtg
     2101 agatgagcac agaacaaaat ccaggctgca gtacagtgtg ctgtggttgt gatacacata
     2161 aaatgtacat ttatttgcta gtgaagactt cttcatgggt ctatagtccc tcacttcttt
     2221 gtatatacct gaggcaaact tatccaggag gtgactagaa cacacctctg gatcagacac
     2281 ttaacagtgg gtaatgcctt gcttagctgg gcttctttct gcaaactgca atcctgtccc
     2341 tggctgtatt ccaaggcata ctttccaaac tgcatggtct ctcatagcat ttattccttc
     2401 acatatctgc tagcacatct tgaacaggat tggcaatgga atttcagaag tgaagtatct
     2461 tgccagggcc actggaggct gtatctgagt gacttttgag cctgtatagc tgttccacac
     2521 tgccctctgg gggggtgagc tagatctcct aaatcttcag ctaccctact aaattatctc
     2581 tgcacagagc taagccctag atctacttgt tgacaataag agtaaatagt attcacatac
     2641 aaaattataa cattggtata gcagcagtga agaggtctac ctcagagaat gattttaaaa
     2701 cataaagatt ttaaattgtg tttatttgga aaagattact gagtatgtaa ctaagagatt
     2761 gtttttattg tgttgtggtt tgtctataaa cttgctgtga gtgcctccga ttgctaccag
     2821 attcaggtct ggacatttac cttacagaaa attaatcacc aggagaaaca aattggttaa
     2881 gaacaaaaac aaaaacaaaa aaaccagtgt ttactgacag tcacacagaa ggaagcaaac
     2941 tgatgcctca actccctcct tccaaggttt agggggaaat gggagttagg ggttatgtac
     3001 agattagcat tcccaggaac ttgagttaga caatcctatg ctagccagag ttattaatct
     3061 cctggtgatt agtctacctt gctgacaaga tgctctggag tgcaaagaga aagccatatt
     3121 ttgggaatga ggagtaagaa ttaagaaaga tagagttact aaaggcaaca gcctgttata
     3181 acaaatcatg aagtaactac tgttattcag cctaacacac tggctacaga agtcttgctt
     3241 gggtccatgt gtaaaactgc ctcctgtaga tttagggaca agtaattctt tttctgtttg
     3301 aagtttcctt tgtcttccta tagattgcaa gtcaaagctg ctgcttttac agtgaagacc
     3361 aaagggtctc ttgtgtctta ttggcagctc tgtgctgtgt tattacctct gctgtcattt
     3421 cttgattttt tttaaa
//
