LOCUS       XM_039082299            2470 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus igE-binding protein-like
            (LOC120094109), mRNA.
ACCESSION   XM_039082299
VERSION     XM_039082299.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2470
                     /gene="LOC120094109"
                     /note="igE-binding protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120094109"
                     /db_xref="RGD:41369833"
     CDS             563..2359
                     /gene="LOC120094109"
                     /codon_start=1
                     /product="igE-binding protein-like"
                     /protein_id="XP_038938227.1"
                     /db_xref="GeneID:120094109"
                     /db_xref="RGD:41369833"
                     /translation="MGSSQSVITALETVLKQRDIKIGGRTLKNFVKEVDRVAPWFACS
                     GSFTITSWDKLGRDLDRKLVERDLRLGTKAIWKLVKNCLVDEVCKAAVVGGQTVLKMV
                     QDGMSETERSERLGTCKRKDVLKKKKSPPVKSADKEGLKLSDSGTSLSTQQPGGGASI
                     YPVKELEVLNLHSSDSSENGILDSEEEAELDEEAAKYEEERYHPEERKVDNRKLLPRQ
                     SPTAPPLYEARSCAFSLVPNRVRRKLRMMFPVFETQEGERVHAPVQYNQIKELAESVR
                     KYRVTANFTLTILERLALNYLTPADWQMIAKATLVNMGQYMEWKALCYEAAQTQARAN
                     ATALTPEQREWTFELLTGQGRFAADQANYHWGAYVQVSSSAINAWKALTKKKGADNQL
                     TRIIQGPQEPFSDFVARMTETAGRIFGDAEQAAPLIEQLVFEQATQECRAAIAPRKNK
                     GLQDWLRVCRELGGPLTNAGLVAAILQSRPCPLKGTDTRSCFQCGKMGHLKRDCRITK
                     GDRRPATICVRCGKGYHRPDRCRSVRDIKGKLLPPLEAQPNEMSKNGSLGPRSQGPQR
                     YGNRFQKAMTLTEETPQEVTQNWTCVPPPTSF"
ORIGIN      
        1 tcggggtctc tgtattgtaa gcttgtgctc tcactctcaa gatgcattaa agctgtttct
       61 gcagaaggat cctttgtgtc ctgcgtcatt cttgctggcg agacgtagcg tgggacattt
      121 ggtgccagaa acccgggaaa aagacctcat cagcacctcc ggagacccct tggtgacaag
      181 gaggattcag aactgcaggt aaaaaaaaaa tacgttcaga gaggcatgcc tttcttggat
      241 tttggtctgg ggttgtcgct gccttgggaa ggatttgttg aggctatggt atttgttctc
      301 ggagccaccc tactctttct tattattatg tactgttttc accgtttctg ctgctaaaag
      361 gacagcagct ggaggcgcgc ctcagtctct cataaataag tgagcttcac gcagctccct
      421 tttactgttg gggagcaggg acgcgatagc accgcccggg aagtgcgcat aagactcccg
      481 tatataagag agcagcgtgt ctgtttctac tcatgccttg tcagatggac gtagataagc
      541 cgccgggcat tcttggtccc tcatgggatc ctcacagtct gtgatcacgg ctttggaaac
      601 ggtgctaaag cagagggaca ttaaaattgg aggaagaaca cttaaaaact ttgtgaaaga
      661 agtggacagg gtggcgcctt ggtttgcctg ttcaggatcg tttacaatca cctcatggga
      721 caaacttgga agggacctag acagaaaatt ggtggagaga gatctgcggc taggaactaa
      781 agccatatgg aaactagtca aaaattgctt agtagatgaa gtgtgtaagg cagcagtggt
      841 aggaggtcaa accgtactca agatggtcca ggatgggatg tcagaaactg aacgtagtga
      901 gagattaggc acgtgcaaga gaaaggacgt cctgaaaaag aaaaagagcc ctcccgttaa
      961 atccgcggac aaggaagggt taaagctttc agattccggc acttccctct ctacacagca
     1021 accgggaggg ggagccagca tataccctgt gaaagagcta gaagtgctga acctccacag
     1081 ttctgatagc tctgagaatg gaatcttaga ttcagaggag gaggccgagt tagatgagga
     1141 agcagctaaa tatgaggaag agagatatca ccccgaggaa cgaaaggtag ataatagaaa
     1201 gcttctgccg cggcagtcgc caaccgcgcc ccctctgtat gaggcgcgct cttgcgcatt
     1261 ctctttagtc cccaataggg tgagaaggaa gctgcgcatg atgttcccag tctttgagac
     1321 gcaggagggt gagcgggttc atgccccagt ccaatataac caaataaaag agctggcgga
     1381 gtctgtcaga aagtacagag ttacagccaa tttcacccta accattcttg aaaggctggc
     1441 cctaaattat ttgacacccg ccgattggca aatgattgca aaagcgaccc ttgtgaacat
     1501 gggccaatat atggaatgga aggccctttg ttatgaggcg gctcaaacac aggccagagc
     1561 taatgccacg gcgttaacgc ctgagcagcg agaatggacg tttgaactct tgacaggaca
     1621 gggtcgcttc gcagcggacc aagctaatta ccattggggc gcttatgttc aagtctccag
     1681 ctcggccatt aacgcctgga aggcactcac caagaaaaaa ggggctgata atcaacttac
     1741 tcgtatcatc cagggacctc aggaaccatt ctcagacttt gtagccagaa tgacagaaac
     1801 tgcgggacga atatttggcg atgcggagca agcagcgcct cttatagaac agctcgtttt
     1861 tgagcaagcc acccaggaat gccgggcagc tatagccccc agaaaaaata aaggattaca
     1921 ggactggctc agagtctgca gagaactcgg cgggcccctt actaatgcag gcttggtggc
     1981 cgccattctc cagtcccggc catgccccct taaagggaca gatacaagat catgttttca
     2041 atgtggaaaa atgggccatt taaaaagaga ctgtaggata accaagggag acaggaggcc
     2101 tgcaactatc tgtgtccgat gtggcaaggg ataccatagg cctgaccggt gccgctcagt
     2161 gagggatatt aagggcaaac tactccctcc cttagaagct cagcctaatg agatgtcaaa
     2221 aaacggatcg ttgggccccc ggtcccaggg ccctcaaaga tatgggaacc gctttcagaa
     2281 agccatgacc ctgacagagg agactcccca agaggtgaca caaaactgga cgtgtgtgcc
     2341 gcctccgact tctttctaat gccccagatg ggcattcagc caattcctgc tcagactgtg
     2401 gggcctttgc ccccaggaac cataggcctt gtccttggga gaggatctct cgccctacaa
     2461 ggactgatag
//
