LOCUS       XM_039082261            1592 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 564-like
            (LOC120094092), transcript variant X1, mRNA.
ACCESSION   XM_039082261
VERSION     XM_039082261.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082261.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1592
                     /gene="LOC120094092"
                     /note="zinc finger protein 564-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 47 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:120094092"
                     /db_xref="RGD:41070127"
     CDS             146..1405
                     /gene="LOC120094092"
                     /codon_start=1
                     /product="zinc finger protein 564-like isoform X1"
                     /protein_id="XP_038938189.1"
                     /db_xref="GeneID:120094092"
                     /db_xref="RGD:41070127"
                     /translation="MKRAASRGGTPPRKATKETETQTSEAWVVWSVLVVVTSALCLRP
                     GPAVICREPGIGRGASLGPPAGRDGLSGLRGCDRELHPGGVGSAGHVPEEPLQRSGWG
                     NLYELGLYGNHIVERLSDDKEETINQILDHDLKKESSPGVNLCECSVCGLAFVSCSSG
                     KGTHTGQGVHDYKCRQCETAFCNYPFQVSDRSHHEDKPHGCQEHGEDFLSFTSLGDFV
                     IPRTEGGPHKCNVCGKGLHYPSSLRIHERIHTGERPYQCEECGKAFSCWGSVRRHQRT
                     HTGEKPYNCKECGKAFSSLSGLKGHTIRHTGGGPYKCKECGKVFNSPSALSKHERTHT
                     GERPFLCKYCGKAFICSTSVRKHERTHTGEKPYECQRCGKAFISNSGLQGHMIRHTGV
                     GPYKCKFCGKAFGSPSAVLRHESAHVV"
ORIGIN      
        1 acacacacac cccaatcccc caaaggggtt gcgatccaca ggttgaagag aaccgttgtc
       61 ctggttgcag cttgtgcaaa tttatcccct agtttttccc ccttggcctc tcagggcgaa
      121 ggggcgggat cgaagtaact gtccaatgaa acgcgccgct agcaggggcg ggacgccgcc
      181 acgcaaagcc accaaagaga ctgagactca gacttcggag gcttgggtgg tctggtctgt
      241 cttggtagtt gtcacttcgg ctctctgcct ccggccgggt cctgctgtga tctgcaggga
      301 accgggaatc gggagggggg cttccctagg acctcccgca ggacgcgatg gacttagtgg
      361 ccttcgagga tgtgaccgtg aacttcaccc aggaggagtg ggctctgctg gacacgtccc
      421 agaggaacct ttacagagaa gtggttgggg aaatctttat gaacttggcc tctatggcaa
      481 ccatattgtg gagagactca gtgacgacaa agaagaaacc atcaaccaaa ttcttgacca
      541 cgacctgaaa aaggaaagct ctcctggagt aaatctctgt gaatgcagtg tgtgtgggct
      601 agccttcgtg tcttgttcat ctgggaaggg tacacacact ggacagggag tacatgacta
      661 caaatgcagg cagtgtgaaa cagccttctg taattaccct ttccaagtca gtgacaggtc
      721 tcaccatgaa gacaaacccc acgggtgtca ggaacacggg gaagacttcc tttcttttac
      781 cagccttggt gacttcgtta tacctcggac tgaaggtgga ccccataaat gtaacgtgtg
      841 cggaaaaggt ttgcactacc ccagctcact taggatccat gaaagaatcc acacaggaga
      901 gaggccctat cagtgtgaag agtgtggaaa agccttcagt tgttggggct cagttcgacg
      961 acatcaaagg acccacactg gtgagaaacc ctacaactgt aaggagtgcg ggaaggcctt
     1021 cagttctctc tcgggcctta aaggacacac gataagacac actgggggtg gaccttataa
     1081 gtgcaaggag tgtggaaaag tctttaactc gcccagtgca cttagtaaac acgagagaac
     1141 tcacacgggg gagagaccct ttctgtgtaa gtactgtggg aaagcgttca tctgctccac
     1201 ctcagtgcgc aaacacgaga ggactcacac tggagaaaaa ccctatgagt gtcagcggtg
     1261 tgggaaggcc ttcatttcta actcaggcct ccaaggacac atgattaggc acacaggcgt
     1321 cgggccttac aaatgtaaat tctgtgggaa agcctttggc tctcccagtg ctgttctaag
     1381 gcatgaaagt gctcatgtcg tgtagggaga gccttcactt tgaggacacg tcagatcctg
     1441 agaaaatctt accatcctag ttcaggtaca gaaaaggatt cctgaaggga agctcttgtt
     1501 tagagaatat gggaaagacg ttgagggtta gactttatgt ggaagcatga agaggcggaa
     1561 gaaaaacctt acaaataaaa gaataaaacc tc
//
