LOCUS       XM_039080614            1704 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus basic proline-rich protein-like
            (LOC120093885), partial mRNA.
ACCESSION   XM_039080614
VERSION     XM_039080614.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080614.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..>1704
                     /gene="LOC120093885"
                     /note="basic proline-rich protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:120093885"
                     /db_xref="RGD:41114013"
     CDS             1..>1704
                     /gene="LOC120093885"
                     /codon_start=1
                     /product="basic proline-rich protein-like"
                     /protein_id="XP_038936542.1"
                     /db_xref="GeneID:120093885"
                     /db_xref="RGD:41114013"
                     /translation="MGIVKLTTKNSHHNHYHHHHAYHCLYLHTTITIIITITINKTKS
                     LSLPPPPPPPSPPPSLPPPPPPPPPPPPPSPPPSPPPSLLPPPPPPPPPSSPPSPPPS
                     PPPSSPPSPPPSSPPSPPPPPPSSPPPSLLPPPPPPPPPSSPPSPPPSPPPSSPPSPP
                     PSSPPSPPPPPPSSPPPSPPPSPPPPPPPSPPPSSPPSPPPSPPPSPPPSSPPSSPPS
                     PPPSSPPPPPPPPPSSPPSLPPPPPPPPPSSPPSPSPSPPPSPPPPPPPSPPPSSPPS
                     PPPSSPPSPPPSPPPSPPPSPPPSLPPPPPPPPSSPPSLPPPPPPPPPPSSPPPPPPP
                     PPPPPPSPPPSPPPSPPPPPPPPPPPPSPPPSPPPSLPPPPPPPPPPPSPPPSPPPSL
                     LPPPPPPPPPSSPPSPPPSPPPSSPPSPPPSSPPSPPPPPPSSPPPSPPPSPPPPPPP
                     SPPPSSPPSPPPSSPPSPPPSPPPSPPPSPPPSLPPPPPPPPSSPPSLPPPPPPPPPP
                     PPSSPPSPSPSPPPPPSPSPPPPPSPSPPPSPPPSSPPPPPPPPPPPPPPPPPPPPPP
                     PP"
ORIGIN      
        1 atgggtatag tcaagttgac aaccaagaac agtcaccaca atcactacca tcaccatcat
       61 gcctaccatt gcctctacct ccacaccacc atcaccatca tcatcaccat caccatcaat
      121 aaaactaagt cattgtcatt accaccacca ccaccaccac catcaccacc accatcacta
      181 ccaccaccac caccaccacc accaccacca ccaccaccat caccaccacc atcaccacca
      241 ccatcactac taccaccacc accaccacca ccaccaccat catcaccacc atcaccacca
      301 ccatcaccac caccatcatc accaccatca ccaccaccat catcaccacc atcaccacca
      361 ccaccaccac catcatcacc accaccatca ctactaccac caccaccacc accaccacca
      421 ccatcatcac caccatcacc accaccatca ccaccaccat catcaccacc atcaccacca
      481 ccatcatcac caccatcacc accaccacca ccaccatcat caccaccacc atcaccacca
      541 ccatcaccac caccaccacc accaccatca ccaccaccat catcaccacc atcaccacca
      601 ccatcaccac caccatcacc accaccatca tcaccaccat catcaccacc atcaccacca
      661 ccatcatcac caccaccacc accaccacca ccaccatcat caccaccatc actaccacca
      721 ccaccaccac caccaccacc atcatcacca ccatcaccat caccatcacc accaccatca
      781 ccaccaccac caccaccacc atcaccacca ccatcatcac caccatcacc accaccatca
      841 tcaccaccat caccaccacc atcaccacca ccatcaccac caccatcacc accaccatca
      901 ctaccaccac caccaccacc accaccatca tcaccaccat cactaccacc accaccacca
      961 ccaccaccac caccatcatc accaccacca ccaccaccac caccaccacc accaccacca
     1021 tcaccaccac catcaccacc accatcacca ccaccaccac caccaccacc accaccacca
     1081 ccatcaccac caccatcacc accaccatca ctaccaccac caccaccacc accaccacca
     1141 ccaccatcac caccaccatc accaccacca tcactactac caccaccacc accaccacca
     1201 ccaccatcat caccaccatc accaccacca tcaccaccac catcatcacc accatcacca
     1261 ccaccatcat caccaccatc accaccacca ccaccaccat catcaccacc accatcacca
     1321 ccaccatcac caccaccacc accaccacca tcaccaccac catcatcacc accatcacca
     1381 ccaccatcat caccaccatc accaccacca tcaccaccac catcaccacc accatcacca
     1441 ccaccatcac taccaccacc accaccacca ccaccatcat caccaccatc actaccacca
     1501 ccaccaccac caccaccacc accaccacca tcatcaccac catcaccatc accatcacca
     1561 ccaccaccac catcaccatc accaccacca ccaccatcac catcaccacc accatcacca
     1621 ccaccatcat caccaccacc accaccacca ccaccaccac ctcctcctcc tcctcctcct
     1681 cctcctcctc ctcctcctcc tcct
//
