LOCUS       XM_039080604            1974 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC120093874
            (LOC120093874), mRNA.
ACCESSION   XM_039080604
VERSION     XM_039080604.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 35% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1974
                     /gene="LOC120093874"
                     /note="uncharacterized LOC120093874; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins, and 54% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120093874"
                     /db_xref="RGD:41116471"
     CDS             1..1974
                     /gene="LOC120093874"
                     /codon_start=1
                     /product="uncharacterized protein LOC120093874"
                     /protein_id="XP_038936532.1"
                     /db_xref="GeneID:120093874"
                     /db_xref="RGD:41116471"
                     /translation="MDAPPCSRKRSMTHSHLRDLIGISPRLKFLVDTGAQHSVLTQAP
                     GQLSDQTAWVQGATGSKRYRWTIDRQVQLATGKVTHSFLHVPDCPYPLLGRDLLTKLK
                     AQIHFEEGGTQVTGPRSTPLQILTLQLEDEYRLYEPEQDKPKSLEIDSWVTKFPLAWA
                     ETGGMGLALQQPPLIIQLKATVTPVSIKQYPMSWEAYQGIKPHIRRLLDQGILVPCWS
                     PWNTPLLPVKKPGTGDYQPVQDLREVNKRVEDIHPTVPNPYKLLSTLPPTHTWYMVLD
                     LKDAFFCLRLSPESQPLFAFEWKDSEMGLSGQLTWTRLPQGFKNSPTLFNEALQRDLA
                     DFRVQHPTLILLQFVDDLLLGATSETACHQGTESLLQTLGRLGYRASARKAQICQTQV
                     TYLGYQLRDGQQWLTPARKQTVANIPAPRNGRQLQEFLGTPGFCRLWIPGFAEMQPPC
                     TLSLNRGCSSSGGQKPDLSDRPLQDDDHTSYTNGSSYLVNGEWKAGAAVTTEDKVIWA
                     SALPAASPHYCHITTGNSTTTTTTTTSTTNTSITTSTSTSTSSSTSTTRTTRTTTIGT
                     NTTRTTTSNTTTLQAWNSKTLPSGPDGVYQSPGTLPPNRSLPTTSRDLGILQPSSLLG
                     IGVLQWQSRNCCCPGHDSTPVKDSNPPSASTVA"
ORIGIN      
        1 atggacgccc caccttgctc ccggaagaga tcgatgacgc attcccactt acgagacctg
       61 attgggattt caccacggct gaagtttctg gtggacacag gagcccagca ctcagtcctc
      121 acccaggccc ctggacaact cagcgaccag acggcctggg tacaaggagc cactggcagc
      181 aagagatacc gttggactat agatcgacag gttcagctgg ctactggtaa ggtgacccat
      241 tccttcttac atgttccgga ctgcccatac cctttgctgg gccgtgactt gcttaccaaa
      301 ttaaaagctc agatccattt tgaagaagga gggacccaag taaccgggcc ccgcagtact
      361 cctcttcaga ttttaaccct tcagttagaa gatgaatata gattatatga accagaacag
      421 gacaagccaa aatctctaga aatagactct tgggttacga aattcccact ggcctgggcg
      481 gagactggcg ggatggggtt ggcgctccaa cagcctcccc taattatcca gttaaaggcc
      541 accgtgactc ctgtctccat taaacagtac cccatgtcat gggaagccta tcagggcata
      601 aagccacata tcaggaggct cttagaccaa ggcatcctag tcccttgctg gtcaccctgg
      661 aatacgcctc tgctacctgt taagaagccc ggcactggag actatcagcc ggtacaagat
      721 ttgagagagg tcaacaaaag agtagaagat attcatccaa ctgtcccaaa cccttataaa
      781 ctactcagca ccctgcctcc cacccatact tggtatatgg tcttagatct gaaggatgct
      841 ttcttctgcc tccggctgag cccagaaagc cagcccttat ttgcttttga gtggaaagac
      901 tctgaaatgg ggctttcagg acagttgact tggacaaggt taccacaggg tttcaaaaac
      961 agcccaacgc tctttaatga ggccttacaa cgggacttgg ctgactttcg agtccagcac
     1021 cccactctta tactacttca gtttgttgat gaccttcttc taggggccac ttctgagaca
     1081 gcatgccacc agggaacaga atccctcttg cagactttgg ggcgattggg ctatcgagct
     1141 tctgctagaa aggctcaaat ttgccagacc caggttactt atttaggcta tcaactaagg
     1201 gacggacagc aatggctgac tccggctagg aaacagaccg tggccaacat cccagcccca
     1261 agaaatggcc gacagctaca ggaattccta ggaacgccgg gattctgccg cctctggatt
     1321 cctgggtttg ccgagatgca gcccccttgt accctctcac taaacagggg gtgctcttcc
     1381 agtggggggc agaaaccaga cctatcggac cgacctctcc aggatgatga ccatacgtcg
     1441 tacaccaatg gtagcagcta cttggtgaac ggggaatgga aagctggagc cgcggtcact
     1501 acggaggaca aagtgatctg ggcaagtgcc ttgcctgctg catcaccaca ctactgccac
     1561 atcaccaccg gcaacagcac caccaccacc accactacca ccagcaccac caacacctcc
     1621 attaccacca gcaccagcac tagcaccagc agcagcacca gtaccaccag aaccaccaga
     1681 accaccacca tcggcaccaa caccaccaga accaccacca gcaacactac cacactgcaa
     1741 gcttggaatt ctaaaactct gccttcagga ccagatggtg tgtatcagtc tcctgggacc
     1801 ctccctccca accgctcact ccccactacc tccagggatc tgggcattct gcagccatct
     1861 tccctcctgg gtataggggt gttgcagtgg cagtctagaa actgctgctg cccagggcac
     1921 gacagcacac cggtaaagga cagcaaccca ccaagcgcga gcacagtggc ctga
//
