LOCUS       XM_039080599            1609 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus sentrin-specific protease 2-like
            (LOC120093869), mRNA.
ACCESSION   XM_039080599
VERSION     XM_039080599.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080599.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 47% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1609
                     /gene="LOC120093869"
                     /note="sentrin-specific protease 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins, and 37% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120093869"
                     /db_xref="RGD:41179485"
     CDS             1..1455
                     /gene="LOC120093869"
                     /codon_start=1
                     /product="sentrin-specific protease 2-like"
                     /protein_id="XP_038936527.1"
                     /db_xref="GeneID:120093869"
                     /db_xref="RGD:41179485"
                     /translation="MSSMDKTPATILTDPLSTKTTTEPPMIVWLTNTVTCQSESCAIA
                     ESRQVSKGHPHGPCRWQLGKQHGRVYCEHSGRGQKRKYQAEGKKAWQHEEPILPLKRL
                     KPQQWEIELGVEEPGQGLIQNPQEVVPFHQKTPEFTKGPEEQAVTETKSVDGGNGPKG
                     PYSNIEEYVQKHLNGMYPSLLGNCQPWGSVSSDSQNAFQHPLDSSKDIKGCVDAQIHA
                     SQTPQICENRVSNGILPKQMPIADAKEKASQDQKQSTGLDHGPLVTADMQKEISSALG
                     PGPQDQVLSCAFNMTITRADMRTLSDSAWLNDNVINFYMNLLVDRNQTQGYPALYAFN
                     TFFYTKLKSGGYRSVRRWTKAVNLFAKELILVPVHLDVHWSLVVTDLREKSIVYLDSM
                     GHKRPDVLELIFHYLQDESKARRHVDLNPSEWKQYSMPTEKIPQQGNDRDCGVFTCKY
                     ADYISRGRPITFSQQHMPLFRKRMVWEILHQSLL"
ORIGIN      
        1 atgtccagta tggataagac acctgcaact atactaactg atcctttatc cacgaagaca
       61 acaactgagc ccccaatgat agtctggctg acaaacactg tgacttgcca atcagaaagc
      121 tgtgccatag cagagagccg gcaggtgagc aaaggccatc cacatggccc ctgtagatgg
      181 caactgggca agcagcatgg gagagtgtac tgtgagcatt caggaagagg ccaaaagagg
      241 aaataccagg cagaaggtaa aaaggcttgg cagcatgaag agcccatcct acctctgaag
      301 aggctgaaac cacagcagtg ggaaatagag cttggggttg aagagccagg ccagggtctg
      361 atacagaacc cccaagaagt ggttccattc caccaaaaga ccccagagtt caccaaaggc
      421 cccgaggaac aggctgtgac tgagacaaag tctgtggatg gaggtaatgg accaaagggt
      481 ccctacagca acatagagga atatgttcag aaacacctca atggaatgta cccaagcttg
      541 ttgggaaact gtcaaccctg gggctctgtg agctcagact ctcagaatgc tttccagcac
      601 ccattggact cctcaaagga catcaaaggc tgtgtggatg cacagattca tgcttctcaa
      661 acacctcaaa tctgtgaaaa cagagtcagc aatggcattc tccccaaaca aatgccaata
      721 gctgacgcca aagaaaaggc ttctcaagac caaaagcaga gcacagggct ggaccatggc
      781 cctctggtca cagcggacat gcaaaaggaa atcagtagcg cacttggccc agggccacaa
      841 gaccaggtct tgagctgtgc cttcaatatg accatcactc gagcagacat gcgcaccctg
      901 agtgacagcg cgtggctcaa tgacaacgtc attaattttt acatgaatct tctcgtggac
      961 agaaatcaga ctcaaggata ccctgccctt tatgcattta acaccttctt ttacaccaag
     1021 ctaaagagtg ggggctacag atcagtccga agatggacca aggcagtaaa cctctttgca
     1081 aaggaactga ttctggtgcc ggttcacctg gatgtgcact ggagcctggt ggtgacagac
     1141 ctaagagaga agagtattgt ctacctggat tccatgggac ataagagacc agatgtcctt
     1201 gagctgatct tccactatct gcaggatgag agcaaagcca gaaggcatgt ggatctgaac
     1261 ccttcggaat ggaaacagta cagcatgcca acagagaaga ttcctcagca ggggaatgac
     1321 agggactgcg gtgtgtttac ctgcaaatac gcagattaca tctccagagg ccgccccatc
     1381 accttctctc agcagcacat gcccctgttt aggaagagga tggtgtggga aatcctgcac
     1441 cagagcctcc tgtagcctca cccaccaggc tgctgaggct gctgggaagg cttttgtgga
     1501 tggagccaag gacttcaggc agggtggtca gaagggcctt gaaacaggtt ctggagtgta
     1561 aagagcgggg gatgccccac aggctttcaa gtaatgctaa cctggaaca
//
