LOCUS       XM_039080592             854 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus phosphomannomutase 1-like
            (LOC120093860), mRNA.
ACCESSION   XM_039080592
VERSION     XM_039080592.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-99                JACYVU010000185.1  76121027-76121125   c
            100-100             "N"                1-1
            101-854             JACYVU010000185.1  76120273-76121026   c
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..854
                     /gene="LOC120093860"
                     /note="phosphomannomutase 1-like; The sequence of the
                     model RefSeq transcript was modified relative to its
                     source genomic sequence to represent the inferred CDS:
                     inserted 1 base in 1 codon; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins, and 97% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120093860"
                     /db_xref="RGD:41400961"
     CDS             1..789
                     /gene="LOC120093860"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: phosphomannomutase 1-like"
                     /protein_id="XP_038936520.1"
                     /db_xref="GeneID:120093860"
                     /db_xref="RGD:41400961"
                     /translation="MAAAVEGACRKERVLCLFDVDGTLTPARQKIDPXVSAFLQKLRS
                     RVQIGVVGGSDYSKIAEQLGDGDEVIEKFDYVFAENRTVQYKHGRLLSKQTIQNHLGE
                     ELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFPELDKKE
                     KIREEFVAALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDEDSFDIIHFFGN
                     ETSLGGNDFEIYADPRTVGHSVVSPQDIVQRCRELFFPETAHEA"
ORIGIN      
        1 atggcagcag ctgtcgaggg cgcctgcagg aaagagcgcg tcctctgcct gtttgatgtg
       61 gacgggaccc tcacgccagc tcgccagaaa attgatcctn aggtatcagc cttcctgcag
      121 aagctacgaa gcagggtgca gatcggcgtg gtgggtggat ctgactactc taagatcgct
      181 gagcagctgg gtgatgggga tgaagtcatt gagaagtttg actatgtgtt tgctgagaac
      241 cggacagtgc agtataagca cggacggcta ctctccaagc agacgatcca gaaccacctg
      301 ggagaggaac tcctacagga cttgatcaat ttctgcctca gctacatggc cctactcaga
      361 ctgcccaaga agcgtggaac cttcattgag ttccggaatg gcatgctgaa catctcgccc
      421 attggccgca gctgcaccct ggaggagagg atcgagttcc cggagctgga caagaaagag
      481 aagatccggg aggagttcgt ggcagccttg aagacagagt ttgctggcaa ggggctaagg
      541 ttctcccgag gaggtatgat aagcttcgac gtcttccctg agggctggga taagcgctac
      601 tgcctggaca gtctggatga agacagcttc gacatcatcc atttctttgg aaatgagacc
      661 agtcttggtg ggaatgactt tgagatctat gctgatcccc ggacagtcgg ccacagcgtg
      721 gtctcccctc aggacattgt acaacgatgc cgagagcttt tcttcccaga gacagcgcac
      781 gaggcatgac ggtgcccaca gctgagcatt ggaccttcaa agagctctga ccaggcctga
      841 agacagaacc atgg
//
