LOCUS       XM_039080499            1607 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ubiquitin-conjugating enzyme E2
            R2-like (LOC120093786), mRNA.
ACCESSION   XM_039080499
VERSION     XM_039080499.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080499.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1607
                     /gene="LOC120093786"
                     /note="ubiquitin-conjugating enzyme E2 R2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 114 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:120093786"
                     /db_xref="RGD:41327657"
     CDS             1081..1359
                     /gene="LOC120093786"
                     /codon_start=1
                     /product="ubiquitin-conjugating enzyme E2 R2-like"
                     /protein_id="XP_038936427.1"
                     /db_xref="GeneID:120093786"
                     /db_xref="RGD:41327657"
                     /translation="MFRKWRDSKGKDKEYAEIIRKQVSAMKAEAEKDGVKVPTTLAEY
                     CIKTKVPSNDNSSDLLYDNLYDNDIDNEDEEEEDADCYNDDDSGNEEL"
ORIGIN      
        1 atttctttag gtgtgtctca gccatttggg attcttctat tgagaatcct gcttacctct
       61 gtgtcccaga gttggattat atggtttgtt gatgtccagt ttcttgagtt ctttatataa
      121 ttttggatat tggcccgctg ttggatgtgg agttagtgaa aatcttttct attcctgtag
      181 gctgccgtct tgtcctattg aaagtgtccc ttttcttaca gaaaaatttc agattcatga
      241 ggtcacattt actaattgtc gatctcagca cccatgctat tggtgctgtg ttgaggaagt
      301 tgtctccaaa ggctctcccc actgtcccct ctgtcaggtt cagtgtgttt ggctttatgc
      361 tgaggtcttt gatccactta gattttggtc tgtgcagggt ggtagctatg gacccatatg
      421 cattcttcta tgcagacgtc cagttagagc acagcatttg atttctgagt ttgtctttgt
      481 tggatgggta ttttgtttct tggtttctgt tatttgtggc ctgctttgaa ctggggggtc
      541 tccactagag ttcagggctg agttctcgag cctctgatcc agcagggagg ttctggggac
      601 acagagtagt cctgtgtggg tggcctacct ggagttctgg tggttgaagt ggcttctggt
      661 cctaagaaaa gaaatgacat ttactgtgtg tatttatatt tgcatgttgt ggcgtggagt
      721 ataaagcagc ttgtggggca ttctcgtcct ctgtcctttt cactcaatga tccacgcaga
      781 gcagcaggct tggtggcaag ttcctttacc tgctgggcca tctcactggc ccctgaaaac
      841 aaaattgcat aatccacttt tcataagcca tcaaatatta tgacctcaaa tttgcatcag
      901 aaatttttta aggggaaaaa ctttaaaact gtagtttctt aaaaactgtg cttgtggata
      961 tgatggacgt ggagcttcac tgtgggttct tctttccttc tcacgactat cgtgctgagt
     1021 gtaatctccc tgcttaatga gcccaacacc ttttccccag ccaatgtgga tgcttcagtc
     1081 atgttcagga aatggaggga cagcaaagga aaggacaagg agtacgctga gatcattagg
     1141 aaacaggtct cagccatgaa agctgaagca gaaaaggatg gagtgaaggt ccccacaacc
     1201 ctggcagaat actgcatcaa aactaaagtg ccttccaatg acaacagctc agatttgctt
     1261 tatgacaacc tgtatgataa cgacattgat aacgaagacg aggaagaaga agatgccgac
     1321 tgttataatg atgatgattc tggaaatgag gagttgtgac atgttccttc agttccctgt
     1381 actgccctga catctcaggc caaagggagg gaagcaagtg gggatctaca gtggccaccc
     1441 agcaaaaact tactcatggg gtgggaagca aacagcccct gatgactcac tcctcttgca
     1501 gatctcagtt tgctcctttt tatgaacctt actggagagg aagttccctc cacagaatgt
     1561 ctgaatcctt gcattcttcc ctccatcact gtattgattc ttttttt
//
