LOCUS       XM_039080485            2717 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus putative sperm motility kinase W
            (LOC120093780), transcript variant X2, mRNA.
ACCESSION   XM_039080485
VERSION     XM_039080485.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080485.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2717
                     /gene="LOC120093780"
                     /note="putative sperm motility kinase W; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:120093780"
                     /db_xref="RGD:40938575"
     CDS             926..2404
                     /gene="LOC120093780"
                     /codon_start=1
                     /product="putative sperm motility kinase W"
                     /protein_id="XP_038936413.1"
                     /db_xref="GeneID:120093780"
                     /db_xref="RGD:40938575"
                     /translation="MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKT
                     VEICKKTIRAILSEMTTLELLHHPNIISLFQILVTANQIHFILQYAPGGNLVELINEE
                     GPLPEEKAKKMFGQIVSAIRYCHSLDIVHRDIKPQNILIDGEGNVKLIDFGLAIKCRP
                     GTLLSRHCGTRGFNAPELVLQQPYDGKSSDVWSLGVLLYFITTGYFPFRGNTINEIEQ
                     KITTGTYTIPHHLSGQLENLIHQILTVSPEMRPSIEEIENHPWIKKCEFKIPTMTDPD
                     YKIIEMLCAMGYNANDILESLQKKRYDEPMGAYLSLKDHVSKGYDLGYITSAKPGDPC
                     PPPPPSPAHPSVFVLPLRRRASEPIFGHHRPPSREQNPLDLILSGLKMSRCVSMPPIS
                     VYYPKKERSTSTRALHSTPVASPCVYNNMSGVEIILPPKQDIEMNTSSPPQTMGWFKR
                     LRKGIRDCISRLCCLPRAPKKKPQHRSSKRVAPLKKAASSTI"
ORIGIN      
        1 ggggcagggg cagcagatgg cagccatggt gatttcatgg gacagcaggg tggaagcagg
       61 aacttcctgg atcagggcag ggacagcaag gaggaagtag aaacttccga ggacaatgac
      121 caagaggtga caacaaaagg taccagatcc acaatcaaag gccagaagtg gagtttatag
      181 taaagtattt ggtcaatgag tagagccaag aagaaactct tcacaatggg caccccaggg
      241 tccctcctgc tctcaaagtc cccagtgctt cattcctttt agatgattta ccagctcccc
      301 ttccttgcag agaggtttct gacctgtctg agtaaccgtc attctgtctt ccttttggaa
      361 agaaatagga atggatggat gaatgagtga atgaatgaat gaatgcataa tgtgaggacg
      421 acaaagtaat cgatctgata ttgggccctc aatgcacttc ccaggtgctg ctcctctaac
      481 tggagtctca ggagccaata gagcagctgg ggaggtgatc aaatctctct caggttgcag
      541 ctttaatgca cttccctgtg cagcacagta ctgcctgtaa ttgctaaaca gtaaatatct
      601 gtctctttga tctgctgaag aagaagctca gagaggctag tttccttttc acaagaatgg
      661 aaagttccct gaggcccaga gttgggacag ccactatggt ttacagcctt gtctgtttgg
      721 tacatttcat gctgtgacct cacaaagaac cacttggatg taagaatgag tgtcctctgt
      781 ataagacagt ggaccagcct gttgaatttg tccataagga ccggggagcc ggttaatgtt
      841 gacctgtggg actccttgat agctgtgtat tttgttagtt gacgggttat tgtacctcac
      901 aacttgtgtt caccagatca cagggatgga catcacttct attaagaaga ctttgggcag
      961 tcagtatagg gtggttttct ttcttggaca gggttcatat ggcagggtga gattggcctg
     1021 gcaccggaga acgcaggccc tggttgccat caaaacggta gagatctgta agaagaccat
     1081 cagggcaatc ctgtccgaaa tgaccacttt ggagttactg caccatccaa atataatttc
     1141 cctcttccag atcctggtta cagcgaacca gattcatttt attttacaat atgctccagg
     1201 aggcaactta gtagaactaa taaatgagga gggcccgctg ccagaagaaa aggcgaagaa
     1261 aatgttcgga cagatcgtat ctgcgataag atattgccat agtctggaca ttgtccatcg
     1321 tgacatcaag ccacagaata tactgataga tggagagggc aatgttaagc tgatcgactt
     1381 tggcctggca atcaaatgca gacctggtac attactgagt aggcactgtg gaaccagggg
     1441 ctttaatgcc cctgaactgg tattacagca gccatatgat ggcaagagtt ctgatgtgtg
     1501 gagtttgggc gtactcctat atttcatcac cactggctac tttcccttca gaggaaacac
     1561 catcaatgag attgagcaaa agattacaac ggggacctat accattccac atcacctgtc
     1621 tgggcaactc gaaaacctga tacatcaaat cctcacggtt tccccagaga tgaggccctc
     1681 tatagaggaa attgaaaatc acccatggat caagaaatgc gagtttaaaa tcccgacaat
     1741 gactgaccca gattacaaaa ttatagaaat gctctgtgcg atggggtata atgccaatga
     1801 catcttggaa tccctccaaa agaaaagata cgatgaacca atgggggcat atttgagctt
     1861 aaaagatcat gtaagcaaag ggtatgatct tggatatatc acttcagcca agcctgggga
     1921 tccgtgccct ccgccacccc catcaccagc acatccctct gtctttgtcc ttcctctcag
     1981 gagaagggcc agtgaaccca tctttggcca ccacagacct ccctcaagag aacagaatcc
     2041 tcttgacctg attctatcag gactcaagat gagcaggtgt gtctccatgc ctcccatttc
     2101 ggtatactat cctaagaagg agagaagcac ttctacccgt gccctccact caacacctgt
     2161 ggcctcccca tgtgtctaca acaacatgtc gggagttgaa ataatcctgc cacctaagca
     2221 ggacattgag atgaatacgt catctccccc tcagacgatg ggatggttta agagactccg
     2281 caaaggaatc agagactgca tttcaagact ttgctgcctc cctcgggctc caaagaaaaa
     2341 accccagcat agatcctcca agagagtggc ccccctgaaa aaggcagcaa gcagtaccat
     2401 ataaaaggct ctcacagtct tgaaggtcca cacatggaaa agacctgagg ggtgcactct
     2461 cctgagtcct gaggattgga aaggacaaga tagtgaagag aacagtggga aagaacagag
     2521 tcaaatagaa atggggctca tggtggcatc ccagagtcta gaggccccaa ccttccttca
     2581 catgcacctg taggtgtttc aaactcagtg gtggttctaa gtaaaaagtg tcaccaggta
     2641 catctatgga tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgcgcgcg
     2701 cgcgcaccct tcctatc
//
