LOCUS       XM_039080415             971 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 40S ribosomal protein S8-like
            (LOC120093766), mRNA.
ACCESSION   XM_039080415
VERSION     XM_039080415.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..971
                     /gene="LOC120093766"
                     /note="40S ribosomal protein S8-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 38
                     Proteins, and 79% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120093766"
                     /db_xref="RGD:41036455"
     CDS             1..750
                     /gene="LOC120093766"
                     /codon_start=1
                     /product="40S ribosomal protein S8-like"
                     /protein_id="XP_038936343.1"
                     /db_xref="GeneID:120093766"
                     /db_xref="RGD:41036455"
                     /translation="MNCRFSQKYGTDEARDRCRDSMLTQCIFVPLFFQRYCRLQSNVL
                     SVGIRSKLHPTATWELSAALCLSSWEGSAQTGHFWVDCPTLPGQRSVLQVPPFYQNLS
                     GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALR
                     LDVGNFSWSSECCTRKTRIIDVVYDASNNKLVRTKTLAKNCTVLIDSAPYRQWYESHY
                     ALPLGRKKGAKLTPEEEEILNKKRSKKIKKK"
ORIGIN      
        1 atgaactgca gatttagcca aaagtatgga acggatgagg ccagagaccg ctgcagagac
       61 tcgatgctga cacagtgtat ctttgtacct cttttctttc agcgatactg cagactgcag
      121 agcaatgtgc taagtgttgg tattcggtct aagctccacc ccacagctac atgggaactg
      181 tcagctgccc tgtgcctctc cagctgggag ggctctgctc aaaccggaca cttttgggtt
      241 gattgtccta ctctgcccgg tcaaaggtca gtcctccaag ttcctccatt ctatcagaat
      301 ctatcaggca tctctcggga caactggcac aagcgccgca agaccggggg taagagaaaa
      361 ccctaccaca agaagcggaa gtatgagctg ggacggccgg cggccaacac taagattggc
      421 cctcgccgca tacacacagt ccgagttcga ggaggcaata agaagtatcg tgctctgaga
      481 ttggatgtgg ggaacttttc ctggagctct gagtgttgta ctcgcaaaac aaggatcatt
      541 gatgttgtct acgatgcatc caataacaag ctcgtccgca ccaagaccct ggcgaagaac
      601 tgcactgtgc ttattgacag cgcaccgtac cgacagtggt acgagtccca ctatgcactg
      661 cccctgggcc gcaagaaggg ggccaagctg actcctgagg aggaagagat tttaaacaaa
      721 aaacgatcaa agaaaattaa aaaaaaataa gatgaaagga aaaagaatgc caaaatcagc
      781 agtcttctgg aggagcagtt ccagcagggc aagcttctca cctgtattgc ctcaagacca
      841 ggccagtgtg gcagagcaga tggctatgtg ctcgaaggca aggagctgga gttctatctg
      901 cggaagatca aagcccggaa aggcaaataa actgccatag ctcgtgtaat aaaggtgttt
      961 gctgttctgt a
//
