LOCUS       XM_039080402            1191 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus igE-binding protein-like
            (LOC120093755), mRNA.
ACCESSION   XM_039080402
VERSION     XM_039080402.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1191
                     /gene="LOC120093755"
                     /note="igE-binding protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 42% coverage of the annotated genomic feature
                     by RNAseq alignments"
                     /db_xref="GeneID:120093755"
                     /db_xref="RGD:41026461"
     CDS             1..1191
                     /gene="LOC120093755"
                     /codon_start=1
                     /product="igE-binding protein-like"
                     /protein_id="XP_038936330.1"
                     /db_xref="GeneID:120093755"
                     /db_xref="RGD:41026461"
                     /translation="MSETERSERLDARKRKDVLRKKKSPPIKSSDKEVPDRVRRKLRM
                     TFPVFETQEGERVHAPVEYNQIKVLAESVRKYGVTANFTLTILERLALNYLTPADWQM
                     IAKATLVNLGQNMEWKALWYEAAQTQARANATALTPEQRKWTFELLTGQGRFAEDQAN
                     YHWGAYNQVSISAIKAWKALTRKGGADNQLTRIIQGPQEPFSDFVARMTETAGRIFGD
                     AEQAAPLIEQLVYEQATQECRAAIAPRKNKGLQDWLRVCRELGGPLTNAGLAATILQS
                     RQRSLKGTDTRSCFRCGKMGHLKRDCRITKGDRRPATICARCGKGYHRPDQCRSVRDI
                     KGKLLPPLEAQPNEMSKNGSLGPRSQGPQRYGNRFQKAMTLTEETPQEVTQNWTCVPP
                     PTSF"
ORIGIN      
        1 atgtcagaaa ctgaacgtag tgagagatta gacgcgcgta agagaaagga cgtcctgaga
       61 aagaaaaaga gccctcccat taagtcctca gataaggaag tccccgatag ggtgagaaga
      121 aagctgagga tgacattccc ggtctttgaa acgcaggagg gtgagcgggt tcatgcccca
      181 gtcgaatata accaaataaa agtgctggcg gagtctgtca gaaagtacgg agttacagcc
      241 aatttcaccc taaccattct tgaaaggctg gccctaaatt atttgacacc cgccgattgg
      301 cagatgattg caaaagcgac ccttgtgaac ctgggccaaa atatggaatg gaaagcgctt
      361 tggtatgagg cggctcaaac acaggccaga gctaatgcca cggcgttaac gcctgagcag
      421 cgaaaatgga cgtttgaact cttgacagga cagggtcgct tcgcagagga ccaagctaat
      481 taccattggg gtgcttataa tcaagtctcc atctcggcca ttaaggcctg gaaggcactc
      541 actaggaaag gcggggccga taatcaactt actcgtatca tccagggacc tcaggaaccg
      601 ttctcagact ttgtagccag aatgacagaa actgctggtc gaatatttgg tgatgcggag
      661 caagcagcac cgctcataga acagctcgtt tacgagcaag ccacccagga atgccgggcg
      721 gctatagcac ccagaaaaaa caaaggatta caggactggc tcagagtctg cagagaactc
      781 ggcgggcctc ttactaacgc aggcttggcg gccaccattc tccagtcccg gcaacgctcc
      841 cttaaaggga cagatacaag atcatgtttt cgatgtggaa aaatgggcca tttaaaaaga
      901 gactgtagga taaccaaggg agacaggagg cctgcaacta tctgtgcccg atgtggcaag
      961 ggctaccata ggcctgacca gtgccgctca gtgagggata ttaagggaaa actactccct
     1021 cccttggaag ctcagcctaa tgagatgtca aaaaacggat cgttgggccc acggtcccag
     1081 ggccctcaaa gatatgggaa ccgctttcag aaagccatga ccctgacaga ggagactccc
     1141 caagaggtga cacaaaattg gacctgtgtg ccgcctccga cttctttcta a
//
