LOCUS       XM_039080347            1392 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus basic proline-rich protein-like
            (LOC120093720), partial mRNA.
ACCESSION   XM_039080347
VERSION     XM_039080347.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1392
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            <1..>1392
                     /gene="LOC120093720"
                     /note="basic proline-rich protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:120093720"
                     /db_xref="RGD:41049206"
     CDS             <1..>1392
                     /gene="LOC120093720"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:1222..1224,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: basic proline-rich
                     protein-like"
                     /protein_id="XP_038936275.1"
                     /db_xref="GeneID:120093720"
                     /db_xref="RGD:41049206"
                     /translation="AASPPSPPPPPPLPPPPRPLPPPLLPPPSPPPPPPSPPPPPPST
                     PPPPRPLPPPLPPPLPPQLPPPPSPSPPPPPQSPGPAPPAPPPSPLPPPPPPPPLPPP
                     PPPLPPPSPPLPPPPLSPPLPPPPSPPPPPQPPPPPSPPPPPPSSPPPSPPPPRPLPP
                     PPPLLPPPSPPLPPPPLPPPLSPPPSPLPPPPPPSSPPPSPPPPRPLPPPPPLLPPPS
                     PLPPPPPSSPPPSSSPPPLPPPPRPLPPPPPLLPLPSPPLPPPPLPPPPSPPPPPPLP
                     PPPRPLPLPPPPPSPPLPPPSPPPLSPLPPPPSPSPPPPPPPPPPLSPPPSPPPPPSP
                     PPPSPPPPLPPPPPSSPPPSSSPPPLPPPPRPLPPPPPLLPLPSPPLPPPPLPPPPSP
                     PPPPLPPLPPLPPLPXPLPPPPPPPLPPPLSPPLPPSSPPLPLPPRPPPPPPAPPPPP
                     PSRPPSPPPPLPPP"
ORIGIN      
        1 gcagcatcac caccatcacc accaccacca ccaccattac caccaccacc acgaccatta
       61 ccaccaccac tactaccacc accatcacca ccaccaccac caccatcacc accaccacca
      121 ccaccatcaa caccaccacc accacgacca ttaccaccac cactaccacc accactacca
      181 ccacaactac caccaccacc atcaccatca ccaccaccac caccacaatc accaggacca
      241 gcaccaccag caccaccacc atcaccattg ccaccaccac caccaccacc accactacca
      301 ccaccaccac caccactacc accaccatca ccaccactac caccaccacc actatcacca
      361 ccactaccac caccaccatc accaccacca ccaccacaac caccaccacc accatcacca
      421 ccaccaccac ctccatcatc accaccacca tcaccaccac caccacgacc attaccacca
      481 ccaccaccac tactaccacc accatcacca ccactaccac caccaccact accaccacca
      541 ctatcaccac caccatcacc actaccacca ccaccaccac catcatcacc accaccatca
      601 ccaccaccac cacgaccatt accaccacca ccaccactac taccaccacc atcaccacta
      661 ccaccaccac caccatcatc accaccacca tcatcatcac caccaccatt accaccacca
      721 ccacgaccat taccaccacc accaccacta ctaccactac catcaccacc actacctcca
      781 ccaccactac caccaccacc atcaccacca ccaccaccac cactaccacc accaccacga
      841 ccattaccac taccaccacc accaccatca ccaccactac caccaccatc accaccacca
      901 ctatcaccac taccaccacc accatcacca tcaccaccac caccaccacc accaccacca
      961 ccactatcac caccaccatc accaccacca ccaccatcac caccaccacc atcaccacca
     1021 ccaccactac caccaccacc accatcatca ccaccaccat catcatcacc accaccatta
     1081 ccaccaccac cacgaccatt accaccacca ccaccactac taccactacc atcaccacca
     1141 ctacctccac caccactacc accaccacca tcaccaccac caccaccact accaccacta
     1201 ccaccactac caccactacc atgaccatta ccaccaccac caccaccacc actaccacca
     1261 ccactatcac caccactacc accatcatca ccaccattac cactaccacc acgaccacca
     1321 ccaccaccac cagcaccacc gccaccacca ccatcacgac ccccatcacc accaccacca
     1381 ctaccaccac ca
//
