LOCUS       XM_039080346            1587 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus basic proline-rich protein-like
            (LOC120093719), partial mRNA.
ACCESSION   XM_039080346
VERSION     XM_039080346.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            <1..>1587
                     /gene="LOC120093719"
                     /note="basic proline-rich protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:120093719"
                     /db_xref="RGD:41119802"
     CDS             <1..>1587
                     /gene="LOC120093719"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:1171..1173,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: basic proline-rich
                     protein-like"
                     /protein_id="XP_038936274.1"
                     /db_xref="GeneID:120093719"
                     /db_xref="RGD:41119802"
                     /translation="SPPPPPPLPPPPRPLPPPLLPPPSPPPPPPSPPPPPPSTPPPPR
                     PLPPPLPPPLPPQLPPPPSPSPPPPPQSPGPAPPAPPPSPLPPPPPPPLPPPPPPPLP
                     PPSPPLPPPPLSPPLPPLPPPPSPPPPPQPPPPPSPPPPPPSSPPPSPPPPRPLPPPP
                     PLLPPPSPPLPPPPLPPPLSPPPSPLPPPPPPPPSPPPPPSPPLPPPPPSSPPPSSSP
                     PPLPPPPRPLPPPPPLLPLPSPPLPPPPSPPPPSPPPPPLPPPPRPLPLPPPPPSPPL
                     PPPSPPPLSPLPPPPSPSPPPPPPPPPPLSPPPSPPPPPSPPPPSPPPPLPPPPPSSP
                     PPSSSPPPLPPPPRPLPPPPPLLPLPSPPLPPPPLPPPPSPPPPPLPPLPPLPPPPXP
                     LPPPPPPPLPPPLSPPLPPSSPPLPLPPRPPPPPPAPPPPPPSRPPSPPPPLPPPPPP
                     PSPPPPPPSPPPPPPPPTPPPPPPYPSPPLPPPPLPPPPPPPPLLPPPPPPLPPPPLP
                     PPPPPPLPPPPLLPPLFPLLL"
ORIGIN      
        1 tcaccaccac caccaccacc attaccacca ccaccacgac cattaccacc accactacta
       61 ccaccaccat caccaccacc accaccacca tcaccaccac caccaccacc atcaacacca
      121 ccaccaccac gaccattacc accaccacta ccaccaccac taccaccaca actaccacca
      181 ccaccatcac catcaccacc accaccacca caatcaccag gaccagcacc accagcacca
      241 ccaccatcac cattgccacc accaccacca ccaccactac caccaccacc accaccacca
      301 ctaccaccac catcaccacc actaccacca ccaccactat caccaccact accaccacta
      361 ccaccaccac catcaccacc accaccacca caaccaccac caccaccatc accaccacca
      421 ccacctccat catcaccacc accatcacca ccaccaccac gaccattacc accaccacca
      481 ccactactac caccaccatc accaccacta ccaccaccac cactaccacc accactatca
      541 ccaccaccat caccactacc accaccacca ccaccaccac catcaccacc accaccacca
      601 tcaccaccac taccaccacc accaccatca tcaccaccac catcatcatc accaccacca
      661 ttaccaccac caccacgacc attaccacca ccaccaccac tactaccact accatcacca
      721 ccactaccac caccaccatc accaccacca ccatcaccac caccaccacc actaccacca
      781 ccaccacgac cattaccact accaccacca ccaccatcac caccactacc accaccatca
      841 ccaccaccac tatcaccact accaccacca ccatcaccat caccaccacc accaccacca
      901 ccaccaccac cactatcacc accaccatca ccacctccac caccatcacc accaccacca
      961 tcaccaccac caccactacc accaccacca ccatcatcac caccaccatc atcatcacca
     1021 ccaccattac caccaccacc acgaccatta ccaccaccac caccactact accactacca
     1081 tcaccaccac tacctccacc accactacca ccaccaccat caccaccacc accaccacta
     1141 ccaccactac caccactacc accaccacca tgaccattac caccaccacc accaccacca
     1201 ctaccaccac cactatcacc accactacca ccatcatcac caccattacc actaccacca
     1261 cgaccaccac caccaccacc agcaccaccg ccaccaccac catcacgacc cccatcacca
     1321 ccaccaccac taccaccacc accaccaccc ccctcccctc cccctccccc tccttctccc
     1381 cctccccctc ctcccccccc caccccaccc ccacccccgc cttacccttc acctccactt
     1441 cctcctcctc ctcttcctcc tccacctcct ccacctccac ttcttcctcc tcctcctccc
     1501 cctcttcctc ctcctcctct tccacctcct cctcctcccc ctcttcctcc tcctcctcta
     1561 cttcctcctc tttttcctct tctcctt
//
