LOCUS       XM_039080167             973 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus spidroin-1-like (LOC120093636), mRNA.
ACCESSION   XM_039080167
VERSION     XM_039080167.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..973
                     /gene="LOC120093636"
                     /note="spidroin-1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     56 samples with support for all annotated introns"
                     /db_xref="GeneID:120093636"
                     /db_xref="RGD:41378596"
     CDS             9..731
                     /gene="LOC120093636"
                     /codon_start=1
                     /product="spidroin-1-like"
                     /protein_id="XP_038936095.1"
                     /db_xref="GeneID:120093636"
                     /db_xref="RGD:41378596"
                     /translation="MDGRHGTACAPSSRGRAAPAVARPPDPLPVPGSHGRRHRLLLPV
                     PKRRAASAQGPPPPSRACVRGPAVRRGGREGGSTRRPLGRPRRARTRAARSAASGGLR
                     VEGYRGGRGGRGERGGTAARSARHWRRTAAASAAAAIFTSAPVSPSRRLGADRRGRGG
                     GRGRGGGALRAGRGSGKRAAGPQRLGRLTLSGHGAVRRSPIGSLGREPGPQGRGGVFQ
                     RARAREAGQKGTRTGLLFPPDL"
ORIGIN      
        1 accacgaaat ggatggacgt catggtaccg cctgcgcgcc cagctcccgg ggacgagccg
       61 ctcccgctgt cgcccggccc cccgatcccc ttcccgtccc cggatcccac ggccgccgcc
      121 accgcctcct cctcccggtc cccaaacgga gggccgcgag cgcgcaggga ccgccgcctc
      181 ccagccgagc gtgtgtccgc ggcccggcgg tccggcgcgg cgggcgggag ggcggatcaa
      241 cgcgccgccc gctcggccgg ccacggcgcg cacggacgag ggcggcccgg agcgcggcga
      301 gcggcgggct gcgggtggag gggtaccggg gcggacgcgg cggacgcggg gagcggggag
      361 ggacagcagc ccgcagcgcg cgtcactggc gacgaaccgc cgccgccagc gccgccgccg
      421 ccatcttcac ttctgcccca gtttctccgt ctcgcaggct gggcgccgat cggcggggga
      481 ggggcggagg gcggggccgc gggggcgggg ctctgcgcgc ggggcggggc tccgggaaac
      541 gggcggccgg gccccagcga ttgggccgct taacgttgtc gggccacggc gctgtaaggc
      601 gctcgcctat tggctcgctg ggccgcgagc ccggccccca ggggcggggc ggcgtgttcc
      661 aaagagcacg tgctcgggaa gctgggcaaa agggcacgcg cacagggctt ctttttcccc
      721 cggatctcta aaggttgtgc gtatgcgaat gtcttgttgc tgtttctcgt cctccagccg
      781 cagttctatt taagagaaag gtaccctgag gaaccagaga tgctcagctt cctactgcag
      841 ttacgtgcct acagagtcca gaagaggacg gcaggccccc tggagctgga gataggcagc
      901 tgtgacctcc ccaacatggc gctggaaaca tagcattctc tgcaagaaca gcatgcaggt
      961 aaccctgggg cca
//
