LOCUS       XM_039091411            3127 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus natural killer cell receptor 2B4-like
            (LOC120093159), transcript variant X1, mRNA.
ACCESSION   XM_039091411
VERSION     XM_039091411.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039091411.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3127
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3127
                     /gene="LOC120093159"
                     /note="natural killer cell receptor 2B4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 31 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:120093159"
                     /db_xref="RGD:41389617"
     CDS             1953..2864
                     /gene="LOC120093159"
                     /codon_start=1
                     /product="natural killer cell receptor 2B4-like isoform
                     X1"
                     /protein_id="XP_038947339.1"
                     /db_xref="GeneID:120093159"
                     /db_xref="RGD:41389617"
                     /translation="MLIFDPVETPHLIVQGKLWANGTCQLSLSCFVPKDDNVSYALYR
                     GSMLISNQRNGTHWENQTDASSLHTYTCNVSNKASWANHTLTSPQSCQSVPSSEVSKQ
                     RQSSGIYKLDQSITQLRRIDKGDGPLRCEETGRMREIVQSLGIVPEANEGAVGAQSSH
                     LLCPSEFNYLPFVVSIGILVKFFHGAIDCFCVWNRKRKQSQSIAKESLTIYEYVKNAQ
                     VSRDQRGHFRASGSSSDVRGDERGQRESDRRLFQVIFRYLPSLFSTSFLALSKEEKEK
                     RNRAEKMEMRQKGHHGAVLNLPRGRTQ"
ORIGIN      
        1 ttgaaaacaa caacaacaac aacaacgaaa acccaaaacc aagagtctgt ttgggctgga
       61 gagatggctc agcagttaag agactgctgt ttcagtcaag tcccagcacc cacatggcag
      121 ctgacagctg tctgtaattg cagttccgga agatctgatg cccccaacac agacataaat
      181 gcgggcagaa caccaaagca catgacgtaa aagtaaacga aggagattgc catacgaggt
      241 aaggggtttt accagggcat tttcacacca gcgtgtcccg gagtgttata tgcaagctct
      301 caagggtagc tattgatttg gtcctgaaaa ctctcttgaa ggaaagccaa gtattcacgt
      361 atctgctggt ctttaggggg ggaaaccccc gtatatttgt ttattcatgt gtgtgttcgt
      421 ttgggtgtgt ggggacggca gaggtggagt ccatcctccc tcttcatcat gtggactctg
      481 gtgatctcgt tcgggtcttc aggcttgacg ttgagtacct tcgccatctt gcttgcccaa
      541 ctgctgttga gccagaggac ttagaaagca attttgttgg tgctacacag gttgcaaggt
      601 aatgagctgg agttcaagtc caggtctttg actgcaaatt gatcgtctag tccagagcgt
      661 ccgtgttgcc tccgctggca gccacctgtc tcgtcaaggt ttggtcaggc tagaaataga
      721 tctaaggatg gaaagagggg atgggcttgg aggaaccaca agtatttgtt gctaaggagc
      781 aaaaaagagg aagaaagcaa gaggcctggc ttctggatat ggccttgaag taaagtgttc
      841 tgggggagca ggggtgctgg gtaccactga ctctatccct ccttggagtt caaagggatc
      901 tttgctgcct gctgtcctac aggatgaatc cagctgtgga agctagggag taacacaaat
      961 ggtttcacat cctttggtgg agggcggtga aaggaggaac agtgtttgca tacgctgaac
     1021 atttgaaatc atagacttcc tgggctgatt agattatttc cgagcaaatc tcaattttat
     1081 gtctcttcct taatcgcccc ataccactct tccctttcaa cattagctcc cacttcctca
     1141 gggtccttct tctcagccca ccctaccccc aagttctttc aaatttctgt ttccacggtg
     1201 cgtgttggta aggggccgtc ttgaataatc gccagtggtt tttctccaca ctgctggtgc
     1261 cactgaggat tcagcaccag gctgaggagg accaagggct gagattttgc agctggtttt
     1321 gtgagtcact atgcactctg agagagcacc cacccactgg aggcagctta gcttgtggga
     1381 acccaactgg agggactgag gctttctcag tggccttgtc agtgtgcaca gcagaagtga
     1441 acagccttga gttgaggaaa ttgtggctgg acaggcaggg aggtagttct gctgtgtcct
     1501 gctggctgtt agctgcagag tctagatatc agagcacctg gaggagacag gggcccctta
     1561 gcctgctctg ttgtgtgggg atgttgcagc aaactgtcct gttgtcactc ttcctgctcc
     1621 tcagagctca tcagggccaa gattgtgcag attcttctga agaagtgctt ggagtctcag
     1681 gaaagcctgt ccagctgcgg ccttccaaca tacaaacaaa aaatgttttt attgaatgga
     1741 agaagaagac aggacatcaa cagactcccc agatcatgac ttgggatact acggaaaaca
     1801 aaagctttaa tatgtgttgt agtgatatct atggttttga gtcttagaat tttgctctta
     1861 gtatcaagtc agctaagcta aatgacagtg gtcactacgt gctggagatc accaacagcc
     1921 aaagaggaat agtgtgcact aaaaacttcc agatgcttat atttgatcct gttgagacac
     1981 ctcacctgat tgtccagggg aagctctggg ctaacgggac ttgtcaactg tctttgtcct
     2041 gctttgtgcc caaggatgac aatgtgagct atgctttgta cagagggagc atgctgatct
     2101 cgaatcaaag gaatggcacc cactgggaga accagactga tgccagcagc ctgcacacat
     2161 atacctgcaa tgttagcaac aaggccagct gggcaaacca caccctgacc tccccccaga
     2221 gctgtcagag tgtcccttcg agtgaggtga gtaaacagcg ccagtcttct ggaatttata
     2281 agctggacca gtccatcacc caattgagga ggatcgataa gggtgatgga cccctaagat
     2341 gtgaggagac aggccgcatg agagagatag ttcaatccct tgggatagtt cctgaagcta
     2401 atgaaggggc agtgggcgct cagtcttctc accttctgtg tccctcagaa ttcaattatc
     2461 tgccctttgt ggtatccatc ggtatcctcg tcaaattttt tcatggggcc atcgattgct
     2521 tctgtgtgtg gaataggaag agaaagcagt cacagtccat cgctaaggaa tctttgacca
     2581 tatatgaata cgtcaagaac gcacaagtca gcagggacca acgaggacat tttagggcct
     2641 ctggatcttc ctcagatgtt cggggagatg agaggggaca aagagaatcg gacagacgtc
     2701 ttttccaggt gatctttaga tatcttccat ctcttttctc caccagtttc ctggctctgt
     2761 ccaaagagga aaaggagaaa agaaacagag cagagaaaat ggaaatgagg cagaaggggc
     2821 atcatggtgc tgtacttaat ctgcccaggg gtagaactca gtagaaatca atagcaaagg
     2881 gcagaatatg tctactactg tcttcccaga tggcagagta ggctggaagg aagctcttgg
     2941 tctctcagaa cactaggaca caagaggatg ggccctggtg ctccattatc cgctccaaat
     3001 ccctggtgct ccatcacctg taccatctcc ctggtgctcc atcacctcct ccatctccct
     3061 ggtgctccat catctgctcc atctccctgg tgctccatca cctgctccat ctccctggtg
     3121 ctccatc
//
