LOCUS       XM_039095006             727 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus sperm-associated antigen 11-like
            (LOC120093117), transcript variant X1, mRNA.
ACCESSION   XM_039095006
VERSION     XM_039095006.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039095006.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..727
                     /gene="LOC120093117"
                     /note="sperm-associated antigen 11-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 8 Proteins, and 83% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120093117"
                     /db_xref="RGD:41368796"
     CDS             15..356
                     /gene="LOC120093117"
                     /codon_start=1
                     /product="sperm-associated antigen 11 isoform X1"
                     /protein_id="XP_038950934.1"
                     /db_xref="GeneID:120093117"
                     /db_xref="RGD:41368796"
                     /translation="MKQRLLPSFVNLLLAALLLPGSSSASSINHLVTEPPSSPQDEFP
                     AQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCS
                     KKKEACCLHPF"
ORIGIN      
        1 tcccctccac agccatgaaa cagagactcc ttccttcctt tgtcaacctc ctccttgcag
       61 ccctgctcct tccagggtcg tccagtgcct cgtccattaa ccacttagtc accgaacccc
      121 ccagttcccc ccaggacgaa tttcctgccc aaggaggaaa tgggtctggg ttgttgcatc
      181 acagagtgaa acgcttccct ccacgcaccc ccccttacca tgagcctgga ccaaattacc
      241 aaattgtcaa ctgcaagaaa aatgagggat tctgtcaaaa atactgtaat tttatggaaa
      301 cacaagtggg ctactgttca aaaaagaaag aagcctgctg cttacatccc ttctgacggg
      361 gctgatcact gaagttgaag tgacctgcac acctgtaagg tctcctggac tccggcgatg
      421 ttctaggtgt gagtgtacta gagaggaccc taaagagaga aagacatctc tctccatgtc
      481 cagcaaccta agcattttat tatgacaaaa ctaaacaact aaggctgtct acacactacc
      541 ttacaaaagg cttgctacct tcagacacat ctccagtgtc acatcattca tgctggaaga
      601 tgtagcaata ataactcttc ataggaaagc attcaatcaa tgtgttcatt catttaagac
      661 ataattttaa ttacttctct ttgtcatgga taccaagaaa atgtgaaaaa gcaacgtggg
      721 taagata
//
