LOCUS       XM_039080484            2795 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus putative sperm motility kinase W
            (LOC120093094), mRNA.
ACCESSION   XM_039080484
VERSION     XM_039080484.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2795
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2795
                     /gene="LOC120093094"
                     /note="putative sperm motility kinase W; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120093094"
                     /db_xref="RGD:40992238"
     CDS             169..1650
                     /gene="LOC120093094"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:742..744,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: putative sperm motility
                     kinase W"
                     /protein_id="XP_038936412.1"
                     /db_xref="GeneID:120093094"
                     /db_xref="RGD:40992238"
                     /translation="MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKT
                     VEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEE
                     GPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKP
                     GTLLSRQYGTRDFNAPELVLREPYDGKSSDVXSLGVVLYFFTTGYLPFRGKTINDVEE
                     RITTGTYTIPTHLSGQLENLIHQILRVSPGMRPSVEEIENHPWIKKCEFKILPKTDPD
                     YKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITPAKPRDPC
                     PPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPI
                     AVYYPKKERSTSTRALHSTPVACPCVCNNMSEVEIILPPKQDIEMNTSSPPQRMGWFK
                     RLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI"
ORIGIN      
        1 tgtaagaatg agtgtcctct gtataagaca gtggaccagc ctgttgaatt tgtccataag
       61 gaccggggag ccggttaatg ttgacctgtg ggactccttg atagctttgt attttgttag
      121 ttgacaggtt attgtacctc acaacttgtg ttcaccagat caaagggaat ggacatcact
      181 tctattaaga agactttggg cagtcagtat agggtggttt tctttcttgg acagggttca
      241 tatggcaggg tgagattggc ctggcaccgg agaacgcagg ccctggttgc catcaaaacg
      301 gtagagatca gcaaggacac catcaggggg atcctgtctg aaatgaccac attggagtca
      361 ttgaaccatc cgaatataat ttctttatat gaggtcctga tcacagggac cggagttcat
      421 tttatattac aatatgctcc aggaggcaac ttaggaaaac taataagtga ggagggccca
      481 ttgccagaag aaaaggcgaa gaaaatgttc ggacaggtcg tatctgccat aagatattgc
      541 catagcctgg atattgtcca tcgcgacatc aagccacaga atatactgat agatggagag
      601 ggcaatatta agctgatcga ctttggccag gccatcaaat gcaaacctgg tacattactg
      661 agtaggcaat atggaaccag ggactttaat gccccagaac tggtattaag ggagccatat
      721 gatggcaaga gttctgatgt gtgaagtttg ggggtggtgc tctatttctt taccactggc
      781 tacttaccct tcagaggaaa gaccatcaat gatgttgagg aaaggattac aacggggacc
      841 tataccattc ctactcacct gtctgggcaa ctcgaaaacc tgatacatca aattctgaga
      901 gtttccccag gtatgaggcc ctctgtagag gaaattgaaa atcacccatg gatcaagaaa
      961 tgtgagttta aaatcctgcc caagactgac ccagattaca aaattataga aatgctctgt
     1021 gcaatggggt ataaagccaa ggacatcttg gaatccctcc aaaagaaaag atacgatgaa
     1081 ccaatggggg catatttgag cttaaaagat catgtaagca aagggtttga tgttggatat
     1141 atcactccag ccaagcctag ggatccgtgc cctccgccac ccccatcacc agcacatccc
     1201 tctgtctttg gccttcctct caggagaagg gccagtgagc ccatctttgg cctccaccac
     1261 agacctccct caagagaaca gaatcctctt gacctgattc tatcaggact caagatgagc
     1321 aggtgtgtct ccatgcctcc cattgcggta tactatccta agaaggagag aagcacttct
     1381 acccgtgccc tccactcaac acctgtggct tgcccgtgcg tctgcaacaa catgtcggaa
     1441 gttgaaataa tcctgccacc taagcaagac attgagatga atacgtcatc tccccctcag
     1501 aggatgggat ggtttaagag actccgcaaa ggaatcaggg actgtttttc aagactttgc
     1561 tgcctcccga gggctccaaa gaaaaaaacc cagcatagat cctccaagag agtggccccc
     1621 ctgaaaaagg cagcaagcag taccatataa aaggtaagct aatgtgggag ggtgcatctc
     1681 cactctgaat tttattgtct ctgtctttat tcatgtattc tcactggaaa tatcagaaga
     1741 gtatacatgg ggtctcttgg gttggggaga agtatgtcta ctccagctgg ataaaaccct
     1801 gctcatttcc gtaccatctg aggaagaaat atttttggag aatgcctagg tggtgctgat
     1861 gtaaacgaac tagctataat cagcaagtga ttgtgggtac agccagtctg aaagggggca
     1921 tataaggctg ttctctatgg ggaacatatt cagatagaga ctctgcttgg ggacctagtg
     1981 cctggcagag tgacagtggt caaagtacta aggggccacc tccatgtctc cctacaattg
     2041 aactggacag gtggagtgta ctgagtcctg tgaggtctga caatgctgct tgaatgaata
     2101 cattgggatt cagctgtgga tacccagttc ttatgtatcc ttcatgcagc agagaggggt
     2161 cagtgtcacc agaagttcca atctggcatt cagagactgg tcgtacagtg tcatgctagt
     2221 ctttcttacc atctactaac cagggctgaa tagctggtag gggatcttcc ttcctaccag
     2281 gctccaggca actaaacctc aaactgaatg tcccgggaca ctgacctgtg ggctcctagg
     2341 tttcttttcc tccaatcatt tgctatgcta ccaacaagga gacctatgct ccctgttagt
     2401 acaacaaata cctgctccaa agttcacaag gagcagaaat gggaagtttc cctccatagc
     2461 tctgttcttg ctgctttcgc taggcattct gtgcatgtgc tggcttggtc agctcctggt
     2521 caggccactg ggcattcaaa gtgacttctg ttcacgttcc cacatgtgct acatacctag
     2581 gacacacctt cccagtatct catagaaacc aagctcactg cagtctcact ctaaagctcg
     2641 aatttccttg aactagcctt cctcttgaga atctactgtg gtaggcttgg ggcactgtat
     2701 gcagcagaca gcagcagact tgagggacat gggaagtggg cttcagaggt gagagcttaa
     2761 gtgcctccag gatgtgattg tgcaccatat tccaa
//
