LOCUS       NM_001401779            1629 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus FKBP prolyl isomerase 2 like 1 (Fkbp2l1), mRNA.
ACCESSION   NM_001401779
VERSION     NM_001401779.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Mar 9, 2023 this sequence version replaced NM_001401779.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643295.5664.1,
                                           SRR26360194.2048815.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676784, SAMN16676786
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            NMD candidate          :: translation inferred from conservation
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1124              JAXUCZ010000001.1  213598436-213599559 c
            1125-1293           JAXUCZ010000001.1  213598098-213598266 c
            1294-1406           JAXUCZ010000001.1  213597643-213597755 c
            1407-1453           JAXUCZ010000001.1  213597479-213597525 c
            1454-1489           JAXUCZ010000001.1  213597147-213597182 c
            1490-1629           JAXUCZ010000001.1  213596931-213597070 c
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..1629
                     /gene="Fkbp2l1"
                     /note="FKBP prolyl isomerase 2 like 1"
                     /db_xref="GeneID:120093053"
                     /db_xref="RGD:41210617"
     exon            1..1124
                     /gene="Fkbp2l1"
                     /inference="alignment:Splign:2.1.0"
     CDS             191..991
                     /gene="Fkbp2l1"
                     /codon_start=1
                     /product="elastin"
                     /protein_id="NP_001388708.1"
                     /db_xref="GeneID:120093053"
                     /db_xref="RGD:41210617"
                     /translation="MPQGAGSHAVRGGALGLGAGRGTAVGGTTESVRAKGRTQWPIAG
                     LGGVGGGVWNLEEELEQVEGGALGSETEGVRSQALGVGLQPGSGVAPVQETKSNISEG
                     VATGEGAELHALKGGAKEPCGELSVSYGPGRPRGGGLRGGRAWGRGRPRTPPGEVVWV
                     ERARRPADSEPVWVPRRPPRAQSWGGAPGGGGTGPDWGVPPEDRGSSEPPSGDVWVPR
                     GRPPAAAAEVWVCWTGSSWVWREWGRPVGTNPVQSDRVWTLRKGASGN"
     exon            1125..1293
                     /gene="Fkbp2l1"
                     /inference="alignment:Splign:2.1.0"
     exon            1294..1406
                     /gene="Fkbp2l1"
                     /inference="alignment:Splign:2.1.0"
     exon            1407..1453
                     /gene="Fkbp2l1"
                     /inference="alignment:Splign:2.1.0"
     exon            1454..1489
                     /gene="Fkbp2l1"
                     /inference="alignment:Splign:2.1.0"
     exon            1490..1629
                     /gene="Fkbp2l1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaagtgaca gcacgagcgg gattggctcc gggggcgcgg cgaggaggtg agcggggggc
       61 cacagcccag gctgggggat ccgggtgcag gagggcagcc tggagcaggc ttgcctgaag
      121 cgggccggag tccgcgtgcc agggagcgac agcaaacgag ggaattgggg ctggggtcgg
      181 gagtctggca atgccgcagg gggcgggctc tcacgccgta cggggcggag ctctggggct
      241 cggggcggga cgcggaacag cggtgggagg gacaacggag tcagtgcgag cgaagggcag
      301 aacccagtgg cccatagctg gattaggagg tgtggggggc ggggtctgga atttagagga
      361 ggagctggag caggtggaag gtggagcctt gggctcagag acagagggcg tgagatccca
      421 ggcgttgggg gtgggacttc agccagggag tggcgtggct cctgtgcagg agacgaagtc
      481 taacatttct gagggcgtgg ccacaggtga gggggcggag ctgcacgcct taaagggtgg
      541 ggccaaagag ccttgcggag agctaagcgt gagctatggc ccagggcgtc cacgcggggg
      601 cggcctccgt ggtggccgcg cctggggtcg cggtagacca agaactcccc ctggagaggt
      661 tgtgtgggtg gagcgggctc ggcgtcccgc tgactctgag ccagtctggg ttcctcggag
      721 gcccccaaga gctcagagtt ggggaggtgc ccctggtgga ggaggcacgg ggccagactg
      781 gggggtgcct ccggaggacc ggggctcctc agagccacct agtggagatg tgtgggtgcc
      841 tcgcggccgg ccacctgcag cagccgcaga ggtgtgggtg tgctggactg ggagcagctg
      901 ggtgtggcgg gaatggggtc gtcccgtcgg gacaaatcct gtccagtcag atagggtttg
      961 gactttgcgt aaaggggcta gcggaaactg aagaacggcg atggggactg ggaggaagag
     1021 gtcaggtagt gagcaaaagg agggggtcct ggctgctgtg gcctcccctg accccctccc
     1081 ctcgctgctg gggtcctcgg ccaagtcccc ttctcactgg actgagacat gaggctgagc
     1141 tggatcctga cagtactgtc catttgcctg agtgccctgg tcacagccac aggggccgaa
     1201 ggcaagcgga agctgcagat tggagtgaag aaacgtgtgg atcactgtcc catcaagtct
     1261 agaaagggag atgtcttaca catgcattac acgggaaagc tagaagatgg gacggagttt
     1321 gacagcagcc taccacagaa ccagcccttt gttttctccc ttggcactgg ccaggtcatc
     1381 aagggctggg accaggggct actggggatg tgtgaagggg aaaagcggaa gctagtgatc
     1441 ccgtctgagc tggggtatgg agagcgggga gcccccccaa agataccagg tggagcaacc
     1501 ctggtgtttg aggtggaact gctcaagatt gagagacgtt cagaactgta gcaggctgca
     1561 gaggggtagg aggcccctat cagggaccag actgtttaaa aacaaacaaa aaaaccttta
     1621 aaaccccaa
//
