LOCUS       XM_039100329             717 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus MLV-related proviral Env
            polyprotein-like (LOC108353271), partial mRNA.
ACCESSION   XM_039100329
VERSION     XM_039100329.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..>717
                     /gene="LOC108353271"
                     /note="MLV-related proviral Env polyprotein-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins, and 74% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:108353271"
                     /db_xref="RGD:11442345"
     CDS             31..>717
                     /gene="LOC108353271"
                     /codon_start=1
                     /product="uncharacterized protein LOC108353271"
                     /protein_id="XP_038956257.1"
                     /db_xref="GeneID:108353271"
                     /db_xref="RGD:11442345"
                     /translation="MPQVLGSDNGPAFVSQVSQLVAKLLGIDWKLHCAYRSQRSGQVE
                     RMNRTIKETLSKLTLATGSKDWVSLLPLVLYQARNTPGSHGLTPFEIVYGTLPPFINF
                     FDSNIAEFANSPSLAAHLQALQIVQRDIWKPLAATYQDRLEQPTVPHPFQIGDTVWVR
                     RHQTKNLEPRWKGPYTVPLTTPAALKVDGIAAWIHASHPKAARPEETADHNIGPQTWK
                     AQRTQNPLKLR"
ORIGIN      
        1 ctcctcgaag aaatcttccc caggtatgga atgccccaag tattggggtc agataacggg
       61 cccgctttcg tctcccaggt aagtcagttg gtggccaagt tattggggat tgattggaag
      121 ttacattgtg cttatagatc ccaaagatca ggacaggtag agcgcatgaa tagaacaatt
      181 aaggagactt tatctaaatt aacgcttgca actggctcaa aggattgggt gtccctacta
      241 cccctagtcc tataccaggc ccggaataca ccgggctccc atggcctgac tccctttgaa
      301 atagtatacg ggaccctacc cccatttatc aatttctttg attcaaatat cgctgaattc
      361 gctaatagcc cttccttggc agcacatctt caggccctac aaatcgtgca gagagacatc
      421 tggaaacctc tagccgcgac ctaccaagac aggcttgaac aaccgacggt gccgcaccct
      481 ttccaaatcg gagacaccgt gtgggtgcgc agacatcaga ccaagaatct tgagcctcgg
      541 tggaaaggac cctatacagt tcccctgact accccggcag ccttgaaggt agacggaatt
      601 gcggcttgga ttcacgcgtc tcaccccaag gcagcccgac ctgaggaaac ggcagatcac
      661 aacatcgggc cccagacatg gaaggctcaa cgcactcaaa accccctaaa gctaaga
//
