LOCUS       XM_039098341            1467 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC108353188
            (LOC108353188), transcript variant X1, mRNA.
ACCESSION   XM_039098341
VERSION     XM_039098341.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1467
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1467
                     /gene="LOC108353188"
                     /note="uncharacterized LOC108353188; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     ESTs, 14 long SRA reads, 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 3 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:108353188"
                     /db_xref="RGD:11371108"
     CDS             521..1144
                     /gene="LOC108353188"
                     /codon_start=1
                     /product="uncharacterized protein LOC108353188 isoform X1"
                     /protein_id="XP_038954269.1"
                     /db_xref="GeneID:108353188"
                     /db_xref="RGD:11371108"
                     /translation="MFSRLRKRFGRGNVDYGETRVKEFGLSSQNAGRETSYPGTELSK
                     NQAMKEKERLIKELQLITEERNDLRDRLRFLTERSMKNRPHIRPNPYYEDLERMEEAV
                     MSILHNLEMENTEVHENNHKLKKEITFSRNLLSQLLMENTCRKKLVPLKQESKEVHLD
                     CALNQKYLVDFNKKDKDHQRPEPALSGLRKCKRAGIGHTPVRELPEE"
ORIGIN      
        1 ccctaacaca cacgcatgtt gtaccctacc atgcagacta tttcttgatg tgatataaag
       61 cacctgtaca taatgagaca agagaacttt tgactgcata ttcaagctgg tgtgaaatct
      121 caggaagttt taatggctaa cattggtgaa tgaggacaat ttgagttatg atgagacatt
      181 tttgtgcaag atatggaagg aaaaattcat ttagatgcat agggattact aaggtttttt
      241 ataatcaagc cttgaggaaa atttggcttt ggaagcatga gatgctcagt gactctgccc
      301 caggaaagtc tcctggaaag ggcacctctg cttatgctca gtacagggag aacattagca
      361 gggagacaaa gtctgctccc catgacatca gctgtccctt cttggacatt ctattgtctc
      421 ctagagagtt cttggcatcc tctgtgatgt caccagtgtt gtagtgacaa ccagggccct
      481 agtttctctc agtctgagtc tggcggttac aagctaagac atgttttccc gtcttcgcaa
      541 gcgttttggg agggggaacg tcgattatgg agagactaga gtgaaggagt ttggcctttc
      601 gtctcaaaac gctgggagag aaacatcata ccctggcact gaactaagca agaatcaggc
      661 catgaaggaa aaggagaggc tgattaaaga gctgcagctc attaccgagg agagaaatga
      721 cctgagagat cgcctgaggt ttctgacaga gagatccatg aagaacaggc cacacatcag
      781 gccaaatcca tattatgaag acctggagag aatggaggag gcggtcatgt caattctgca
      841 caacttagag atggagaaca ctgaggtcca tgagaacaac cataagctga agaaggagat
      901 taccttctct agaaacctgc tcagccagct cctgatggag aacacatgta ggaagaagtt
      961 ggtcccactg aagcaggaga gcaaggaggt acatcttgat tgtgcactga accagaaata
     1021 tttggttgac ttcaacaaga aagataaaga ccatcaacgg ccagaaccag cattatcagg
     1081 tctcagaaag tgcaagagag ctggaattgg acacacacca gtaagagagc ttcctgaaga
     1141 ataagttgct ttctcaggag tccctgatga ccaacaacat cctgaatgaa aacagcactt
     1201 gagagacaac ttgggggacc gcctttcatt atgtgtgcta gaggagaaac agcaatacgt
     1261 ctgtgcttct aaatgttcgt taagaatatg cttttagaaa tatttttgtt atgattttaa
     1321 ttgaagtttt ctttttgttg tttcatattt atatgttctt gttactattt ttactttcaa
     1381 atatttttaa atatttttat tcatgttaat cttgttttgt tgtaaaaatg tatttgttat
     1441 gaataaaaat tgaattctat ctcttga
//
