LOCUS       XM_039093742             396 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus protein transport protein Sec61
            subunit gamma pseudogene (LOC108353050), mRNA.
ACCESSION   XM_039093742
VERSION     XM_039093742.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039093742.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..396
                     /gene="LOC108353050"
                     /note="protein transport protein Sec61 subunit gamma
                     pseudogene; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 13 Proteins, and 91% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:108353050"
                     /db_xref="RGD:11467873"
     CDS             184..396
                     /gene="LOC108353050"
                     /codon_start=1
                     /product="protein transport protein Sec61 subunit
                     gamma-like"
                     /protein_id="XP_038949670.1"
                     /db_xref="GeneID:108353050"
                     /db_xref="RGD:11467873"
                     /translation="MNMDQVMQFVQPSWQFVKDSIHLVKRCTKPDRKDFQKIAMATAT
                     GLAIMGFIGFFVKLTHTPINKIIVGG"
ORIGIN      
        1 cgtccgtttt gaaatcattt ctggtttcac aagaaaaaga aggatatcat aataataaag
       61 atgccctcac gtatactgaa atcgccacac caattttaag aaagaataag atgtaaaata
      121 gatattttat gggctcaatt ctctcctaaa ctacgtgtct ttatcctcgc aaactgccat
      181 cccatgaaca tggatcaggt aatgcagttt gtccagccaa gttggcagtt tgtaaaggac
      241 tcaattcacc tggttaaaag atgcaccaaa cctgatagaa aagatttcca gaagattgcc
      301 atggccacag cgactggact cgctatcatg gggttcattg gcttctttgt taaactcacc
      361 cacaccccta ttaataaaat tattgtgggt ggctga
//
