LOCUS       XM_039092871             341 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 40S ribosomal protein S28 pseudogene
            (LOC108352861), mRNA.
ACCESSION   XM_039092871
VERSION     XM_039092871.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092871.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..341
                     /gene="LOC108352861"
                     /note="40S ribosomal protein S28 pseudogene; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 2 ESTs, 130 long SRA reads, 7 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:108352861"
                     /db_xref="RGD:11455995"
     CDS             23..232
                     /gene="LOC108352861"
                     /codon_start=1
                     /product="40S ribosomal protein S28-like"
                     /protein_id="XP_038948799.1"
                     /db_xref="GeneID:108352861"
                     /db_xref="RGD:11455995"
                     /translation="MDTSRVQPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIR
                     NVKGPVRESDVLTLLESEREARRLR"
ORIGIN      
        1 cctccgctag atctccgcca tcatggacac gagtcgcgtg cagcccatca agctggctag
       61 ggtaactaaa gtgctgggca ggaccggatc gcagggacag tgcacgcagg tgcgagtgga
      121 atttatggat gacaccagcc gctctatcat ccgaaacgtc aaaggccctg ttcgagagag
      181 tgatgtgctc accctgttgg agtcagaaag agaagctcgg aggttgcgct gaccttgctg
      241 ctgggttctg gatatccact ccttagccca tggaatgacc tgcaactgtt aaataaagca
      301 tttgtattca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//
