LOCUS       NM_001409039            1246 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus SMR1 protein-like (LOC108352824), mRNA.
ACCESSION   NM_001409039
VERSION     NM_001409039.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000014.1.
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-75                JAXUCZ010000014.1  20185003-20185077   c
            76-145              JAXUCZ010000014.1  20181869-20181938   c
            146-1246            JAXUCZ010000014.1  20176794-20177894   c
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p22"
     gene            1..1246
                     /gene="LOC108352824"
                     /gene_synonym="VCS-alpha3"
                     /note="SMR1 protein-like"
                     /db_xref="GeneID:108352824"
                     /db_xref="RGD:11434380"
     exon            1..75
                     /gene="LOC108352824"
                     /gene_synonym="VCS-alpha3"
                     /inference="alignment:Splign:2.1.0"
     exon            76..145
                     /gene="LOC108352824"
                     /gene_synonym="VCS-alpha3"
                     /inference="alignment:Splign:2.1.0"
     CDS             88..516
                     /gene="LOC108352824"
                     /gene_synonym="VCS-alpha3"
                     /note="SMR1-alpha3"
                     /codon_start=1
                     /product="SMR1 protein-like precursor"
                     /protein_id="NP_001395968.1"
                     /db_xref="GeneID:108352824"
                     /db_xref="RGD:11434380"
                     /translation="MKPLYLIFGLWILIVCFPVSEGDRGQRRQHNPRRQQDPSTLPHH
                     LCLQPNGVQMRLTRNLPPSTITVDPPPFLVCIPGFISGAVFNQLGTTEYHYQCQLTAP
                     DPRSLSNPPNQLHTTEQANTKTDDKISNTTATTQNSTDTF"
     exon            146..1246
                     /gene="LOC108352824"
                     /gene_synonym="VCS-alpha3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtattccacc actcaaaatt aactgaccag agagcttctg accagcacat ttccctgctt
       61 agaagtttct ccaaggggct accaaagatg aagccactgt atttgatctt tggcctctgg
      121 attcttatag tatgcttccc ggtgagtgag ggtgacagag gccagaggag acaacataat
      181 cctagaagac aacaagatcc ttcaactctt cctcatcatc tctgtcttca gcccaatggt
      241 gtgcaaatga gactaacaag aaatttaccc cctagtacaa taacagttga tccacctcct
      301 tttcttgttt gtattcctgg ttttatcagt ggagcagtat tcaatcaact aggtacaact
      361 gaatatcatt atcagtgtca gctaactgct ccagacccta gatctctaag caatcctcct
      421 aatcaacttc ataccacaga acaagcaaat acaaaaacag atgacaaaat ctccaacact
      481 actgcgacta cccaaaattc cactgatact ttttgaaggt ggtggcaaat aataaattcc
      541 ttttggcagt tagaatagca taaatcaaaa cactgtgtaa ttttgggaga aataatcttg
      601 aaaggcttga gaaacaacct ttacccacgg attatagaac atgacaataa agagctgagc
      661 agcattacac agcatctcct gttgtcctca ttgtgacgac gcaccaccta ctgtgttatt
      721 tgtataaaag taatccttcc agaaaccttg ttccagaagg cacagtggtc attttgggaa
      781 atacaactgt aatgtacaat catgagaaca gaaaaaataa aataggatgc ccccttgagt
      841 gtcaaccatg aaataattaa taactacaga ccatgatgta tatattaaaa gtatttctcc
      901 acacagcatg ttcctagaaa ttattgagta gaatagtatc attacatttg acccaatgag
      961 tgttttacct caatgcattc acacaatttt acatgaaaaa gacttaaaaa tatattacat
     1021 gtgtatacag cattttctat tcagacatga ttcctttaaa atctagtgca cctatcttac
     1081 acagcattca tatcatcagt gaactatcac aaattcaagg tttggttaat gtgtataaga
     1141 accaataaaa tttaaaagaa aattatatat cattttagat gaagtacttg aatatataca
     1201 acttataaag tcaacaaatg ctctagaaat agatcctgaa agttac
//
