LOCUS       XM_039091154            1012 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus glutamyl-tRNA(Gln) amidotransferase
            subunit A, mitochondrial pseudogene (LOC108352562), partial mRNA.
ACCESSION   XM_039091154
VERSION     XM_039091154.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..>1012
                     /gene="LOC108352562"
                     /note="glutamyl-tRNA(Gln) amidotransferase subunit A,
                     mitochondrial pseudogene; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:108352562"
                     /db_xref="RGD:11487222"
     CDS             512..>1012
                     /gene="LOC108352562"
                     /codon_start=1
                     /product="glutamyl-tRNA(Gln) amidotransferase subunit A,
                     mitochondrial-like"
                     /protein_id="XP_038947082.1"
                     /db_xref="GeneID:108352562"
                     /db_xref="RGD:11487222"
                     /translation="MAAWQRGSVATVAAVAAVAAVAAVPGFEALGSDTGRSTRNPAAQ
                     CGIIGFKPNCGLVSLHRLIPLVNSMSMPGIFTSCVDDTATVLGGLAEHDPKDSTTVKG
                     PVKPPTIPSVPDVSRQCIQIPKEYLVPELPREVLALWSQASDLFASEGAKVDDVSATH
                     LLLFFFF"
ORIGIN      
        1 gcagcactga agcagtgcca agttacacca acagagttct gcaagaaatg tctctccctc
       61 atcaagaaaa ccaagtatct aaatgcttcc cttactgtat cagaaaaggt ggcttttaag
      121 taagctgaag aatcagagaa aagatacaag aaaggtcagt ctcttggaga agtagatgga
      181 atgcctcatc acatctggcc tcggacaaca tgggcatcaa atatgttaaa aggttctgta
      241 ccaccttaca atgctacagt ggttcagacg ttgttggatc agaaagctct actcatgggg
      301 aaaacaaatt ttgatgagtt tgctatggga tctggaagaa cagatagcct gtttagacca
      361 gttaaaaacc cctggactta ttcaaagcaa tacagagtgg gatttaggtc agtgatagag
      421 caaagcaata cagagaaaga agccgacacg atgcccatga gaattcacac tggctggtaa
      481 ctggaggaag ctcggttggc agcgtggcag catggcagcg tggcagcgtg gcagcgtggc
      541 aaccgtggca gccgtggcag ccgtggcagc cgtggcagcg gtcccgggct ttgaggctct
      601 gggatcggac actggcagat ccaccaggaa ccctgctgcc caatgtggga ttattggttt
      661 caaaccaaac tgtggcttag tttccctgca ccgccttatt cccctggtga attcaatgag
      721 catgccagga atcttcacca gctgtgtgga cgatacagca actgtgttag gtggactggc
      781 tgaacatgac cccaaagatt ccaccacagt aaaaggccct gttaagccac ccacgattcc
      841 cagtgtgccg gatgtgagca gacagtgtat acaaattcca aaggaatatc tagtaccaga
      901 attgccaaga gaagtactag ctctctggtc ccaagcttct gacctctttg cgtctgaagg
      961 agccaaagtg gatgacgtct ctgccaccca ccttcttctt ttttttttct tt
//
