LOCUS       XM_039088931            1082 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus glyceraldehyde-3-phosphate
            dehydrogenase pseudogene (LOC108352348), mRNA.
ACCESSION   XM_039088931
VERSION     XM_039088931.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1082
                     /gene="LOC108352348"
                     /note="glyceraldehyde-3-phosphate dehydrogenase
                     pseudogene; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 long SRA read, 74 Proteins, and
                     23% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:108352348"
                     /db_xref="RGD:11507219"
     CDS             81..1082
                     /gene="LOC108352348"
                     /codon_start=1
                     /product="glyceraldehyde-3-phosphate dehydrogenase-like"
                     /protein_id="XP_038944859.1"
                     /db_xref="GeneID:108352348"
                     /db_xref="RGD:11507219"
                     /translation="MVKVGVNGFGRIGRLVTRAAFSCDKVDIVAINDPFIDLNYMVYM
                     FQYDSTHGKFNGTVKAENGKLVINGKPITTFQERDPANIKRGDAGAEYVMESTGVFTT
                     MEKAGAHLKGGAKRVIIFAPSADAPMFVVGVNHEKYDNSLKIVSNASCTTNCLAPLAK
                     VIHDNFGIVEGLMTTVHVITATQKTVDGPSGKLWRDGHGAAQNIIPASTGAAKAVGKV
                     IPELNRKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVVKQAAEGPLKGILGYTE
                     DQVVSCDFNSNSHFSTFDAGAGIALDDNFVKLISWYDNEYGYSNRVVDLMAYMASKE"
ORIGIN      
        1 ttttttcggc tctctgctcc tccctgttct agagacagcc gcatcttctt gtgcagtgcc
       61 agcctcgtct catagacaag atggtgaagg tcggtgtgaa cggatttggc cgtatcggac
      121 gcctggttac cagggctgcc ttctcttgtg acaaagtgga cattgttgcc atcaacgacc
      181 ccttcattga cctcaactac atggtctaca tgttccagta tgactctacc cacggcaagt
      241 tcaacggcac agtcaaggct gagaatggga agctcgttat caatgggaag cccatcacca
      301 ccttccagga gcgagatccc gctaacatca aacggggtga cgccggtgct gagtatgtca
      361 tggagtctac tggcgtcttc accaccatgg agaaggctgg ggctcacctg aagggtgggg
      421 ccaaaagggt catcattttc gccccttcag ctgatgcccc catgtttgtg gtgggtgtga
      481 accatgagaa atatgacaac tccctcaaga ttgtcagcaa tgcatcctgc accaccaact
      541 gcttagcccc cctggccaag gtcatccatg acaactttgg catcgtggaa gggctcatga
      601 ccacagtcca tgtcatcact gccactcaga agactgtgga tggcccctct ggaaagctgt
      661 ggcgtgatgg ccatggggca gcccagaaca tcatccctgc atccactggt gctgccaagg
      721 ctgtgggcaa ggtcatccca gagctgaaca ggaagctcac tggcatggcc ttccgtgttc
      781 ctacccccaa tgtatccgtt gtggatctga catgccgcct ggagaaacct gccaagtatg
      841 atgacatcaa gaaggtggtg aagcaggcgg ccgagggccc actaaagggc atcctgggct
      901 acactgagga ccaggttgtc tcctgtgact tcaacagcaa ctcccacttt tccacctttg
      961 atgctggggc tggcattgct ctcgacgaca actttgtgaa gctcatttcc tggtatgaca
     1021 atgaatatgg ctacagcaac agggtggtgg acctcatggc ctacatggcc tccaaggagt
     1081 aa
//
