LOCUS       XM_039087649             578 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L35a pseudogene
            (LOC108352207), mRNA.
ACCESSION   XM_039087649
VERSION     XM_039087649.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..578
                     /gene="LOC108352207"
                     /note="60S ribosomal protein L35a pseudogene; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins, and 98% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:108352207"
                     /db_xref="RGD:11437457"
     CDS             214..546
                     /gene="LOC108352207"
                     /codon_start=1
                     /product="60S ribosomal protein L35a-like"
                     /protein_id="XP_038943577.1"
                     /db_xref="GeneID:108352207"
                     /db_xref="RGD:11437457"
                     /translation="MSGRLWCKAIFAGYKRVLRNQREHMAPLKIEGVYARDETEFYSG
                     KRCAYVYKAQNNTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHGIR
                     VMLYPSRI"
ORIGIN      
        1 tctctgtgtg tgtatgtgtg tatgtgtgtg tgtgtgtgtg tgtgtgtgct tctacacacg
       61 agtgccaagt acatgtaccc ttaagaaaca atagagtagc tttccgccat cttggcgcct
      121 ttggaggcct gcggggaaca ggacttctaa aacaaaacaa aacaaaacaa aacaaaacaa
      181 aaaaaaaaca aaaaaaacaa aaaaaaccca agtatgtctg gaaggctgtg gtgcaaggcc
      241 atttttgctg gctacaagcg agtcctccgg aaccaaagag agcacatggc tcctcttaaa
      301 attgaaggtg tttatgcccg agatgaaact gagttctact cagggaagag gtgtgcttat
      361 gtgtacaaag cacaaaacaa tacagtgact cccggaggca aaccaaacaa aacccgagtg
      421 atctggggaa aagtaactcg agcccatgga aacagtggca tggttcgtgc caaattccga
      481 agcaaccttc ctgcaaaggc cattggacac ggaatccgtg tgatgctgta cccatcccgg
      541 atttaaacta atggagagta aataaataaa agttaaaa
//
