LOCUS       XM_017597782            1765 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus leucine-rich repeat-containing protein
            37A3-like (LOC108352174), mRNA.
ACCESSION   XM_017597782
VERSION     XM_017597782.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086028) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..1765
                     /gene="LOC108352174"
                     /note="leucine-rich repeat-containing protein 37A3-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 15 long SRA reads, 1 Protein"
                     /db_xref="GeneID:108352174"
                     /db_xref="RGD:11429765"
     CDS             1..1410
                     /gene="LOC108352174"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein
                     37A3-like"
                     /protein_id="XP_017453271.1"
                     /db_xref="GeneID:108352174"
                     /db_xref="RGD:11429765"
                     /translation="MGRHWVEVKDFVLLRVRENLLDAEIDEVREKEKTAMLVQPSRRL
                     GPKFKRGIFEKRWEPARAEEDSLAEIEKAERRLLSMSRAPEGTGSLRKRHFKEARVKS
                     LWSKQSAQTPVENSTTDRQLGSPASMELEHKLEQKPRALVENSFPSEPLLPKDHGKEL
                     SSSLGPALVDTAPVPKSLPEFLDRRKDLSDTIFVLESANANVKRAKGSNPNLQPEERR
                     GNLRKKKSHFQLIAKRPVAASSAVRSLVNSPAQGVLSSLGNLSYPERPFSESYTASQP
                     STEIPLEENQAATDNVKENILKLTVTVPAKIISENKPREKPTTGSIVSTSNLVPTVQQ
                     TSKPQSDFTVGSDTHVPSTEAAHPSLMSPGEQFESHLNQQLRPLIPNNDVRRLISHVI
                     RTLKMDCSDTHVQLACGKLISRTGLLMKLLSEQQDFKLSRTDWDTDQWKTETYINEST
                     EAQGSGTKSAHKRSSRIQC"
     polyA_site      1765
                     /gene="LOC108352174"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgggaagac actgggtgga ggtaaaggac tttgtcctgc tgagggtgag agaaaatctg
       61 ctagatgcag aaattgatga ggttcgagag aaagagaaaa ccgccatgct tgtgcagccg
      121 tcacgccgtt taggtcccaa attcaaacga ggaatatttg aaaagagatg ggaacctgcc
      181 cgggcagagg aagacagtct tgcagagatc gagaaggcag agagacggct cctcagcatg
      241 agcagggccc ccgaggggac aggaagctta aggaagaggc acttcaagga ggcgagagtc
      301 aagagtctgt ggagcaagca aagcgcccag acgcctgtgg agaacagcac cacggacagg
      361 cagctcggga gcccagcctc aatggagctg gagcacaagc tggagcagaa gcccagggcg
      421 ttagtggaaa attccttccc ttcagagccc ttactcccaa aggatcatgg gaaggaactc
      481 tcttcctccc taggaccggc cctggtggac acggctccgg ttccaaaatc gctacccgag
      541 tttctagaca gacggaaaga cttgtctgac accatttttg ttttagaaag tgcaaatgct
      601 aatgtgaaga gagcaaaggg ttctaaccca aatttacaac ctgaagagag acgtggaaac
      661 cttaggaaga aaaaatctca tttccagttg attgcaaaga ggccggtggc agcatcgtct
      721 gcagtgagga gcctggtaaa ttcccctgca caaggggtct tgtcatcttt aggcaacctg
      781 agttacccag aaaggccctt ttcagaatca tatacggctt cacagccttc tacagaaata
      841 cctctggaag aaaatcaggc ggcaacagat aatgttaaag aaaatattct caaactaacc
      901 gtcactgtgc ctgcaaaaat tatatcagaa aataaacctc gtgagaaacc tactacaggt
      961 tctattgtgt ctacatccaa cttagttcca accgttcagc aaaccagcaa gccacagtca
     1021 gacttcactg tggggtctga tacgcatgtt ccttccacag aagctgctca cccatcgctc
     1081 atgtcaccag gagaacagtt tgaatcccat ctaaaccagc agctgcggcc cctcatccct
     1141 aacaacgatg tgagaaggct catctctcac gttatcagga ctttgaagat ggactgctct
     1201 gacactcatg tgcaactggc ctgtggcaag ctcatctcca gaacaggcct cctgatgaag
     1261 cttctcagtg aacagcaaga tttcaagttg tccaggaccg actgggatac agaccagtgg
     1321 aaaaccgaga cctacatcaa tgagagcaca gaagcgcaag ggtctggaac caagtcagct
     1381 cacaaaagaa gttccaggat acagtgttaa aaacaagctc atctatgact gtagcagtga
     1441 ccattttaac taacacttcc tgtctcactg gagtaaggac gattccagga agaaatttcc
     1501 agaaagaaaa attcacactt tcaaatgatg tttccaaaaa ggtcagcatc ctctgcatcg
     1561 agaagtctca gaagtccccg tcaggagggg ccttttcatc ttcaggagac ttgaattctc
     1621 tggagaattc tttgtcagga ttacatcatc tttcagaacc ttctagaaca gtgtttttca
     1681 ccttctagag tgacccttta atacagttct catgctgtgg tgactcccca accatatcct
     1741 tattatattg ctacctcata actaa
//
