LOCUS       XM_039087591            5306 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC108352082
            (LOC108352082), mRNA.
ACCESSION   XM_039087591
VERSION     XM_039087591.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5306
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5306
                     /gene="LOC108352082"
                     /note="uncharacterized LOC108352082; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     and 99% coverage of the annotated genomic feature by
                     RNAseq alignments"
                     /db_xref="GeneID:108352082"
                     /db_xref="RGD:11359066"
     CDS             1..864
                     /gene="LOC108352082"
                     /codon_start=1
                     /product="serine/arginine repetitive matrix protein
                     1-like"
                     /protein_id="XP_038943519.1"
                     /db_xref="GeneID:108352082"
                     /db_xref="RGD:11359066"
                     /translation="MDNRKVKPKGTSLGARDRSRGSEKPGLTPPPSVRRHTAVNQHSC
                     PPPPSDPGRAPGLRAGARPGDRPDRDRCVKEGDGQTSLGELLSCARVRARGPQGTTPG
                     GWGSAGGRASAGRRSGPSRSPLELRRLPPPLPPPPPGECSGVCPVEPPYQSRPLLQRR
                     RRHSSAASAAALCSPSSAAAPQPPASAARTPRAAATLCRPLGPRPRPPRRAGRRLRLR
                     AVDAAATDADASSSAPPSFSLKANKHHGGGRRPPPTPASERPAHRRLSNIPASYWLTL
                     LDATIPRRVGG"
ORIGIN      
        1 atggacaaca gaaaagtaaa gcccaaaggc acctctcttg gggcgcgtga ccggagccgg
       61 gggtccgaaa agccagggct cacgccaccg ccctcggtac gccgccacac tgccgtcaat
      121 caacactcct gccccccccc accctccgac ccaggccgag ccccgggact ccgcgcgggg
      181 gcgcggcccg gggaccgacc ggaccgcgat cgctgtgtca aggaggggga cggacagacg
      241 tcactcggag agctactaag ttgtgcgcga gtgcgcgctc ggggtcccca gggcacgacc
      301 cctgggggat gggggagcgc aggcggcaga gcctcggcgg gacgtcgctc gggcccgtcg
      361 cgctcacctc tcgagctgcg ccgccttcct ccgccgctgc cgccgcctcc tcccggtgag
      421 tgcagcgggg tctgccctgt ggaaccacca taccagtccc gcccgctgct gcagcgccgc
      481 cgccgccact cctcagccgc ctcagccgcc gctctttgtt ccccctcctc agccgccgct
      541 cctcagccgc ccgcctcggc cgcccggacc ccacgagccg ccgctacgct ctgccgccct
      601 ctcggacccc ggcctcgccc tcctcgccgc gccggccgcc gccttcgcct ccgcgccgtc
      661 gacgccgccg ccaccgacgc cgacgcctcc tcttccgcgc ccccctcgtt ttcattgaaa
      721 gcaaacaagc atcatggcgg cggccgccgt ccccctccca ccccagccag cgagcgcccc
      781 gctcaccgcc gtctctccaa catcccggct tcctattggc tgacgctgct ggacgcgacc
      841 atcccgcgtc gggtgggggg gtgactcctc gcagctcgac gctttagccc cgtctacgtt
      901 cccccgcgtc tcagagtagt gagccggccc ggcgcgctcc tgcccgccct cccagcctct
      961 cttcccgctc tctctgcgcc tatgcttctc cgcgccttct atttcctctc ctaaagctgt
     1021 tcttccacgg ttcagttgct ccttttcttt ctcgtccact tttatatcca ctttaccatt
     1081 gattttcccc ctcctcttga ttcacttttt tcttccttgg cctgtcaatc acagataaaa
     1141 ttctcagtcg gttaaccctg tccagtatct tgatctgccg agagacaaaa ctttaaattt
     1201 tcaatagtca actattgttc ctgccctaac tatgcagaaa aaaaaaatta acaggcagtt
     1261 tttgataatg gagtcctaat ttaagtaacg aatcatagct gcattcaaag gctaacacag
     1321 tctattcatg acaaactgtg ttttcaggta aactggaaaa ggaatgggct gattaatgat
     1381 actaacatca ggaaaaagta gctgactggt attctggaca cagggattaa tccagctcca
     1441 ccttgtcgag tcatagtgta tgggcaagag taacacccaa cagacttaaa atacaccggc
     1501 actatagact gacgggttca gcgtgaagga aaagagctgc ccctacctcc atggggcaga
     1561 tcagcccaaa agctgagcgt gaaatggttt ccaggaacta acaaggaaaa aataagtgca
     1621 tgtctctcac agaagtccat caggaatgag ttccaggatg tgggaactgc aaggctgttg
     1681 cctaaggcag gagagaactg ggcaagcaaa acactgaggg acaaaaggcc ttccaagaac
     1741 cagatgttct gttcaaggca gtttgtgttt gcctggcccc agcattgcct tgagatcacc
     1801 cactgcctac cgtttgccag gatagcagtg tcagtctagg cttctggtgc catgagacac
     1861 tggaaaagtt aaggcaatgg aaacacccat catacgtgag gaattagtaa ggacaggcgc
     1921 agatgatcta cctgaagata tatgagctac ctgaagccct gacctatgca ggtcaatcag
     1981 tgcctatttt atacaaagag tacaaccagg ctgaggggcc aagggtgtag acatcctgct
     2041 gggctgttcc cattccagtg ctgtgccctg ggaacctgtg ctccagccta gagaagaggg
     2101 tgtctttttg caactcatct gcccaagggg agctgcactt ttgagagtga ctgtaggcct
     2161 ccagaggagc ctcgttatgt aacaaaaaac cttagcctca ttaagcaaca attctattat
     2221 aattcagaag tcagatactt agacagttct actggtctca cttgtggtct ttcatgccag
     2281 tgcctcacag aggtgttgaa tgatggatat ctggcacatt tgtatccctt aaccaagctc
     2341 ctccatctat gttgggagtg cttcctttta cctttgtgga tgatcttctc cagttggagg
     2401 tcattctgga tcactatccg ggcaactcag ggatctaagg gaaaagaaaa agagtcactc
     2461 aagtcttctt tctctgtatt ccattcgcca ggcacgcaca agcacagcgt ggatttaaga
     2521 gaggagacaa gccaaggagc agttgtgcac gcacatagcc cggtgcacct attcagcacc
     2581 attgaggtag actagccctg caaagactgg ggtccccaag aatgcatggt attgctcaaa
     2641 ttgattgcat taacgattgt ctgatcaagc caatcctggc aaactgaact gccaaagaac
     2701 cagagcgctt tattatagaa ggtccatggt tttataaggg aaagacaagc cataccagag
     2761 agcatgaaat atggacccgg ggtagttatt cgattctgaa aatcctctgc taaggtggag
     2821 gcttggtgtc cgaggagcac cgctgacaac ctgagtccct tatccgtgtg tgctaaggac
     2881 agtaatatat ccttgccatc cacctctctt tctctgggct cagccccaca gttttcttca
     2941 gttagaatgt ggtattataa agttacaggt ccccatcaat cgtcttcaca gtattttgtt
     3001 atctttaggt ctagtgtatt agatttcatt tgattcaaaa ttcagttcaa acagctttaa
     3061 ggaataagaa aatgagaaag gaaattagtt ggctcaaata gctttgaagg ccaggaaaag
     3121 tataccattc aagtgtgact tgatctgggg actgaggaca ttctaagatc tagtctcatc
     3181 catggtgacc acgtcatcag aagccatatt gaatcaaagc agatgttaac ttctacaggg
     3241 tttaagacca gcaagaaaat gagagtttgt cgtcttgggc ctgacttcat ttctatttct
     3301 gaactaaata ccatcttcag gagaatctct taccctgacc agaaagaaat cacattccat
     3361 ccccataccc ccatgtaatt gggctggatt cagaagaaat ggagagaatt ggggtgagag
     3421 gtgagatgat gctgttggga aagagaaaca gaagcagaat ggcaggaagc cacagaaacc
     3481 taaagtttat tctctctcca gtctcctaca ttcagaggcc cctgctagcc tcttctcttc
     3541 tcaacgtgtc tgatttgtcc cggtttcaat cctgccgggt agaattgaga gatgtctgga
     3601 agtcttctaa accagaaaac aggtcttctg ctctgagctc aacatgctcc ctgaagactc
     3661 acctcagagg atcaacaaga accggacgag gcagcaggtc tgtttctgtt ttgacctatg
     3721 tatcatggtt tcaaagaatt aagctaattt tcaattgcta tacaaaaatt actagggact
     3781 tggagggcac ctcaagtgtg cgtcacctga ctattataaa caaggctctg gcttggctcc
     3841 tcacgagaag aaataagaaa gaaaaagtgt cagtcatgaa tttgggagta acttaaaaag
     3901 cagaaaagca tgaagaagaa agtgtgcctc accctggttc ccaccccaac cgcaccccct
     3961 aaaagctaag catttggatt tggacttctg gtaaacctca agcttacttg ccagataaaa
     4021 gtatttactc ccaggatgag aagtactgaa gtgtcctaac tactaaaggt ttcatgccct
     4081 aaagtttaat gcatgttctg agaatgtctt gaaacaaggc aagttttaaa gttaggcaaa
     4141 tcacattcca aataacattc ctggtacatt tttgtttcac taacagatac ctaccaattc
     4201 aggctagtaa acctgtaaat ttttggcagc gggtgcatct ggagggggca ggtggggaga
     4261 tcatggctca gtgggtaaga gcacttcctt gtgcaagcat gaagacaccc catcatcttt
     4321 ctgacctctt cataaatgca catttatgtg ttttcggaaa ctttggcccc agcaacgagc
     4381 aggtgatttg gtgtcagttt tgatgtgtag ggcagagggg tttgggcaat gctggaaaag
     4441 cccagagatt ccttccacct caaatgtaag ctaccaacgc ctacaagtga ttaatcaccg
     4501 atcctcccct gggtgaagag cactgtccgt tacattgctc cttattataa gatacgaggt
     4561 gttagagaga tggcaggaac caaactgaaa gtctgtaaag tgaattgcag agaattctca
     4621 aaactaatcc tgtatcctgt gatgattaat tttgcttgtc accttggttg gatctagaat
     4681 caattaaatg gcaggtcttt tcaagggtac tctttttttt ttttttaact tctaattgtt
     4741 ttaagacagg gtctcactat gtagtcctgg atggcttgga attcactatg cagaccaaat
     4801 tatatataaa taaaaaggtt tcccagaggc atcagttcat ggttgcttcc tcttgttgcc
     4861 tttgtgctag aagcaagaca aaggacactt ggtggtagga atatagagag acgagagcta
     4921 ctcggccatg ctgagcgatg caccgtgacc agctgtctca agcccccgat gcagcaactt
     4981 ccctacaata accgatggta acccggaact gggagtggaa ctattttctc aacagcagga
     5041 gaaactaagc acagggaaca agtcccagga gggcgagcag cacccctgac catcaccaga
     5101 ggaaattcaa acaaagcgtt ttcatttcct atccgtttgt tcggaagatc agtttttcct
     5161 cttcaagtta atactgtttc ctttactaaa gtaagattct tattgtgtaa aaattaacca
     5221 cttcagaaca tataattcag tagcgttcag tgcacttgca atactgtaaa cccacctctc
     5281 tccggttata aagtattttc atccca
//
