LOCUS       XM_039084440            5007 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC108351885
            (LOC108351885), transcript variant X1, mRNA.
ACCESSION   XM_039084440
VERSION     XM_039084440.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5007
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5007
                     /gene="LOC108351885"
                     /note="uncharacterized LOC108351885; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 8 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 14 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:108351885"
                     /db_xref="RGD:11396250"
     CDS             3246..3962
                     /gene="LOC108351885"
                     /codon_start=1
                     /product="uncharacterized protein LOC108351885 isoform X1"
                     /protein_id="XP_038940368.1"
                     /db_xref="GeneID:108351885"
                     /db_xref="RGD:11396250"
                     /translation="MFRQPLRLFQKESVDQGETTPRLKEDDLLSSSLEGRKSFWGRLG
                     FGRKASSQNVISKQEECLKELEELKFEIQKCQFERDEFYQILDLYIYDNWDHRLDVEL
                     PILQSEHEMRMMAMQMMTSSISEAMERYKELIQVNSSYRIRHSQLLREQTQLKNNIQI
                     LLNEKRELLVEQTERPASSVEAKRLCEEAGMNICVPSAKEQQFHEKSTLRVHFTSMKH
                     EIQLPSHLASPSSSVQQKDT"
ORIGIN      
        1 gtggcagagg gcgaggaatg gcagaaagaa tggcagctcc actgagagca aaggataacc
       61 cttctaggcc tatgacctcc taattaattt atcttctcac ctgatgccta ttcacatttt
      121 cttactatca tacaactgtg atcttgatga gcagctggtc tcttgttttc ttaatcagtt
      181 ctttgttgtc acagacgttt ttaacttact ccagcccctg agacttactc ataccttctg
      241 tatgcagtag gacccttggt gggcctgtca tctcaaaatt agaaggttcg gtaatccaaa
      301 agattggact ccagtttacc tcaggctagg aaagaagtca gccaccatta gtaaaagagc
      361 aagggaaaaa ttacatagga aaaagaagtg gcttaatcag tagaaaagat cctcaacttc
      421 taaggcccgc acatctgcac ccctctcttc tgagctttgc atagtgatgt ataactccag
      481 atggtagtaa aaggcagagt tcttcccaga aaggtcaaac atgattttca ctcttacatc
      541 tgtgaggttg ggtggcatta tagcacacat tcaggtggaa ttataacacc taggataaga
      601 agacagaatc cacatatcac aatgccaaat ggacaccctc ctgaacttat ggacccattg
      661 acaaaaccat tgcctcttgt gtaccatctg gatgaagtac caagttcaca gacagttctt
      721 caccaacttc ccaaaccagc gaactggagc atgaagaaag ccaagtccaa ggcattcaaa
      781 accagcatcc tcacgaatgc caccaggaaa ggctttggta aaagaaggga ggtactgaga
      841 cagttggccc tcatacactc agagaagact gtgccaggag aattggggaa ggattgtggg
      901 agagtaatca ggtatcagta gtcaagaaaa agaaaaaaat ataaatagaa ataaaataaa
      961 ggtctttaac aaaatgggac ataatgtatt gctgaactaa ctctactctg tttacacttg
     1021 cacatgcttt aacatctaca gtcatttaca tatactatgt atacagcaaa gattaatgta
     1081 gcagagaaca ggcagatcaa agatccattg ttccctcaca tctatgtggc tctgcttccc
     1141 tttatcagga ctatggaggc ctctgctcat ccaggtctca gggctcaacc aaaatgcagt
     1201 cccctatgat ctctggccaa gtgctcttct gttcccagta gaactctgcc tcaggctgca
     1261 gaggcactga agggttcacc ttcaaggtac aaccactctt tcagtctttc caggctctct
     1321 gttactcaac tggaggcttc agcagaggcc tttcatctca ataacagaag tttacctgat
     1381 ccaaaacatt gggaagccat cctacactcc tgattggctg gttacctgag accaaacaac
     1441 atagctctct tctgtatgcc tgttttcctg atttgaaagt aaatattgtg tgcatctgtg
     1501 gtgttggtgg taagaaaaaa tccttaacat gaataacagg accatgcaga gcatggcttt
     1561 acattctatg tacaaattga atagctagat ggaattacca aagaaaacaa taagaatcct
     1621 aacaacaatt acagaaataa tgaaatgaaa taaaacaaaa acaaaagcaa aaacaacaat
     1681 actttgtggg tgctggaatt taaggcacgt attaattttg accagctttg taggtatttc
     1741 caataaaaag caaacaaaca aacaaacagc cttattaaaa gtgctgcagg tgcaggagag
     1801 aaagctggga gatgtcctgt gctgctgccc ccatgctgtg attctgcagc aacaacttcc
     1861 ttgggaatag gaacctgtat gcagtgggat cccttgctgg gcctgtcatc tcaaaaagag
     1921 gggcttccct aatcccaaac cttggaatcc agttgacttc aggccaggaa tgaagtcaac
     1981 catcattagt gaaagagcaa gggaaaaatt acataggaaa aaatatgtgc cttaatcaga
     2041 aaagatcctc aacttctaag gcctccacaa tctccacccc tctcttctga gctgtgcata
     2101 gtgatgttgt ataactccag atggtagtaa aaggcagagt tcttcccaga aaactcatac
     2161 atgattttca ccctgacatc tgtgaggtga ggtggcatca tatcacagag tcagcacacc
     2221 caggataagg acacagaagc cacagatgac aatgccaaat ggactccctc ctgaacttat
     2281 ggacccatta aaattgaggt ttagcctaac cttaggccat tccactccct gcccatccgc
     2341 ctgattttta tgtttgctct gagtaaaaga tcagcgtgta gccccaaata tcctcaggat
     2401 tggacttgga aattcaggaa gaacgatatt ggagaaggga tggctatgtg gttacaatgt
     2461 ggtaacacaa ggtccaggtt gacgtttgct cgctgatgtc cgatttcact gtcttgttat
     2521 atttgagaaa gggaggatgt ccaacttaat atataaaagg tacagaaatt tattatttta
     2581 tatatgccct gtagttgatc cctatgtttc aagaaaaaag gagtttttat tctaaaaaaa
     2641 taagataata gaccattgat tttgtgaaat acatggatat gtaaataaaa acaatgtcaa
     2701 ctgtcaagga ctgcacagta agcaaatatt tccaggtttt atacactcag aggtctagaa
     2761 gaaacatatt ggcctccata aaaaggaaaa ccttaggaat cgaaatgtgt gtcacatgca
     2821 ttgtctcgag tagtagattt acttttaaga aaaaactccc tcttccttgg tccctagaga
     2881 tttgggtgct aagaaaaatc tgttctctca ttcaggttgt aagcagccct ccccagcaaa
     2941 agcactgttg agttctaatg atgcacagag aaacatctag cttagcaata gaggttgcca
     3001 aatgctattc ccagtgatgt atgagagact ggaggaaagg gtccgcacag aaattgatca
     3061 atttttggag agctagttag caggtaggtc atagaacttc ccagtggcat catcagtaag
     3121 cccttcactg gacaatctat tgtatctaag agatccctag aatcttctgt gatgtcacca
     3181 gtgttgtggt gacaccaact gcctttggga tattccttca gttccctttg ggttcacaaa
     3241 caggcatgtt tcgccagccg ctcaggctat ttcagaagga aagtgttgat caaggagaga
     3301 ccacaccaag gctgaaggaa gatgacctcc tctcatcttc cttggaagga aggaaatcat
     3361 tctggggaag gcttggtttt ggtaggaagg catcatccca aaatgtcatc agtaagcaag
     3421 aggagtgttt aaaggaactg gaggaactta aatttgaaat ccagaagtgt caattcgaga
     3481 gggatgaatt ttatcaaatc ctggaccttt atatctatga taattgggac cacaggctgg
     3541 atgtcgaatt gccaatactt caatccgaac atgagatgag aatgatggct atgcaaatga
     3601 tgaccagttc aataagtgag gccatggaga ggtacaagga gctcatacaa gtgaacagtt
     3661 cctaccgcat caggcactcc cagcttctgc gtgaacaaac tcaattgaag aacaatatac
     3721 agattttgct gaatgagaag agagaactgc tggtggagca gactgaacgg ccagcatcct
     3781 ctgtggaggc aaagaggctc tgtgaagagg ccggaatgaa catctgtgtc cccagtgcaa
     3841 aggaacagca gtttcatgag aaaagtactc taagagttca ctttacatcc atgaaacatg
     3901 aaatacagct gcccagtcat ttggcatctc catccagctc tgtacagcaa aaggacactt
     3961 aaggtctgaa attctccagg agaaactcga acaagacaca aaccagggca agatctccct
     4021 tggagagaag tgctacagga ggagaactaa gtgtgcacag caaatacacc actattgcat
     4081 ctcatctgta atgtccatag caattgtgga ctgcattttc ctcctttagt tttatttctt
     4141 tggattgaat aggccgtact ttcacctccc caccctccag caagtgtaaa cttttggagg
     4201 gactcagaga agtgctgatg cacatcaatc aagaggtgct ggtcatccag aaagactgtg
     4261 cacgtgtaaa tgtgtacttg tcctggtggg tcatccagaa gagtttcatg gagatcagtt
     4321 cacaacattg gaaagacttt gagataaagt ctgtaatatc atttctactc agtattggat
     4381 ggctttgtcc ttaatacccc cactccaaca aaacagacct acttccactc ctcttggaaa
     4441 gattattacc atcagtaact gcttgtctac tatgtctcca aggaaagaca caggctataa
     4501 atctattctg cagaaggagc agcaaaaaat gcttagcgca gctcctctat ttaagtgtgg
     4561 ctgagttttg attattttgg ttatttggtt ttcctcctat tcatttgaag ttttgttatt
     4621 tatgtgttgt tgttttgttc atttggtttt ctattttgat aaggatatag actgtatata
     4681 ttgacaacct gcatctggtt actatcatgt aaattggatg tatcctggtg aaaaaaaaga
     4741 gtaatctcaa actcttcact cttaagaacc ttctttattg atcattagtg tcaacatctg
     4801 aagtcccaca gctatcaggg agggatggat ctctgcattc tcatggggac tgggcatcaa
     4861 aatcacttcc cagtcagact gagattcaaa ggcaattata cagtcactgt tcactgtgtt
     4921 ccaaactctg tgaatttcaa cttcatattg catatattac ccactgtgta tgcttactgt
     4981 caaatatata gttacctcta aattata
//
