LOCUS       XM_039084382            1372 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC108351878
            (LOC108351878), transcript variant X1, mRNA.
ACCESSION   XM_039084382
VERSION     XM_039084382.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084382.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1372
                     /gene="LOC108351878"
                     /note="uncharacterized LOC108351878; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:108351878"
                     /db_xref="RGD:11447770"
     CDS             96..710
                     /gene="LOC108351878"
                     /codon_start=1
                     /product="uncharacterized protein LOC108351878 isoform X1"
                     /protein_id="XP_038940310.1"
                     /db_xref="GeneID:108351878"
                     /db_xref="RGD:11447770"
                     /translation="MFRQLLRLFRKESGDQGETTPRQKEDDLLSSKTGRRKSFRGRLG
                     FGRKTSSQIVISEQEKCRKELEELKLEIQKCKFERDELYQILDFYIYDDWDLRLDVEL
                     PILQSEHERRMMAMQMMTNSISDAMERYKEVIQVNSSYRIRHSQLLHEQAQLKNKIQI
                     LLNEKRELLVEQTELPTSSVEAKRLCEEAGMNICVPRAKQQQEI"
ORIGIN      
        1 agatccctag aatcttctgt gatgtcacca gtgttgtggt gacaccaact gccattggga
       61 tattccttca gttccctttg ggttcacaag caggcatgtt tcgccagctg ctcaggctat
      121 ttcgcaagga aagtggagat caaggagaga ccacaccaag gcagaaggaa gatgacctcc
      181 tctctagtaa aacaggaagg aggaaatcat tccggggaag gcttggattt ggtaggaaga
      241 catcatccca aattgtcatc agtgagcaag agaagtgtcg aaaggaactg gaggaactca
      301 aacttgaaat ccagaagtgt aaattcgaga gggatgaact ttatcaaatc ctggactttt
      361 atatctatga tgattgggac ctcaggctgg atgtcgaatt gccaatactt caatccgaac
      421 atgagaggag aatgatggct atgcaaatga tgaccaactc aataagtgat gccatggaga
      481 ggtacaagga ggtcatacaa gtgaacagtt cctaccgcat caggcactcc cagctcctgc
      541 atgaacaagc tcaattgaag aacaaaatac agattttgct gaatgagaag agagaactgc
      601 tggtggagca gactgagctg ccaacatcct ctgtggaggc aaagaggctc tgtgaagagg
      661 ccggaatgaa catctgtgtc cccagagcca agcaacagca ggaaatataa acatcgtata
      721 agggagttta aagcaatcag gaagcctgca cccaaatccc gtggtggaga gtgctgaaca
      781 ccgagaaatg cagataatcc tgagaccaca ggacagaaag ccacttctgc ccagctctgc
      841 ccatatatct ggcccaatat tcatctgcat gatgcctctg gaaacaggaa tagaggagca
      901 gtcagcggca ggaacctgct tggttcagcc tgggcccaga actgacccgg gccctgagga
      961 tttttgaaga aaaccagagg catacaactc tctgtttcct gattgtggct ttttttttta
     1021 tttgaagctc taaacaccat tttgttgttg ttgtttttta attggatatt tttcatttcg
     1081 aattcaaatg ttattccttc cttgttttcc agaaataagt ccgaatacca tcgccctccc
     1141 cctcttctat aaggaattcc cttcaccatc catccacttt cccagcctag gcaggaccaa
     1201 gggctgctca ttccatttgt gcccaagaag accatcctct gatacacatg cagatggagc
     1261 catggcacag tccctgtata gtgattgggt agtggtttag tctctgggaa ctctgcttgg
     1321 caggcatggt tgttctcatg gggttgttag tcccttcagc tctttcaatc tt
//
