LOCUS       XM_039082344             430 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L35a pseudogene
            (LOC108351691), mRNA.
ACCESSION   XM_039082344
VERSION     XM_039082344.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082344.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..430
                     /gene="LOC108351691"
                     /note="60S ribosomal protein L35a pseudogene; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:108351691"
                     /db_xref="RGD:11482331"
     CDS             63..362
                     /gene="LOC108351691"
                     /codon_start=1
                     /product="60S ribosomal protein L35a-like"
                     /protein_id="XP_038938272.1"
                     /db_xref="GeneID:108351691"
                     /db_xref="RGD:11482331"
                     /translation="MSGRLWCPAIFAGYKRGLRNQREHTTLLKIEGVYARDETEFYLG
                     KRCAYVYKAKNNTVTPGGKPNKTRVIWAKVTRAHGNSGMVRAKFQSNLPAKAIGH"
ORIGIN      
        1 tttccgccat cttggcgcct ttggaagcct gctgggaaca ggacttctaa aaaaaaacaa
       61 gtatgtctgg aaggctgtgg tgcccggcca tttttgctgg ctacaagcga ggcctccgga
      121 accaaagaga gcacacgact cttcttaaaa ttgaaggtgt ttatgcccga gatgaaactg
      181 agttctactt aggaaagagg tgtgcttatg tgtacaaagc aaaaaacaat acagtgactc
      241 ctggaggcaa accaaacaaa accagagtga tctgggcaaa agtaactcgg gcccatggaa
      301 acagtggcat ggttcgtgcc aaattccaaa gcaaccttcc tgcaaaggcc attggacact
      361 gaatccgtgt gatgctgtac ccatcccgga tttaaactaa tggagagtaa ataaataaaa
      421 gtagatttgt
//
