LOCUS       XM_039113377             464 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L35a pseudogene
            (LOC108351377), mRNA.
ACCESSION   XM_039113377
VERSION     XM_039113377.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039113377.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..464
                     /gene="LOC108351377"
                     /note="60S ribosomal protein L35a pseudogene; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, 149 long SRA reads, 13 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:108351377"
                     /db_xref="RGD:11469370"
     CDS             88..435
                     /gene="LOC108351377"
                     /codon_start=1
                     /product="60S ribosomal protein L35a-like"
                     /protein_id="XP_038969305.1"
                     /db_xref="GeneID:108351377"
                     /db_xref="RGD:11469370"
                     /translation="MSGRLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLG
                     KRCAYVYKAKNNTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIR
                     VMLYPSRISTNGE"
ORIGIN      
        1 aatagaggtg agggggagtt tctgctgctg aactttgagg gcagatttct agggcctgct
       61 gggaacagga cttctaaaaa aacaagtatg tctggaaggc tgtggtgcaa ggccattttt
      121 gctggctaca agcgaggcct ccggaaccaa agagagcaca cggctcttct taaaattgaa
      181 ggtgtttatg cccgagatga aactgagttc tacttaggca agaggtgtgc ttatgtgtac
      241 aaagcaaaaa acaatacagt gactcctgga ggcaaaccaa acaaaaccag agtgatctgg
      301 ggaaaagtaa ctcgggccca tggaaacagt ggcatggttc gtgccaaatt ccgaagcaac
      361 cttcctgcaa aggccattgg acacagaatc cgtgtgatgc tgtacccatc ccggatttca
      421 actaatggag agtaaataaa taaaagtaga tttgtaaaaa aaaa
//
