LOCUS       XM_017593104            2194 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus high mobility group protein B1-like
            (LOC108350839), mRNA.
ACCESSION   XM_017593104
VERSION     XM_017593104.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017593104.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2194
                     /gene="LOC108350839"
                     /note="high mobility group protein B1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 Proteins, and 96% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:108350839"
                     /db_xref="RGD:11440908"
     CDS             1550..2194
                     /gene="LOC108350839"
                     /codon_start=1
                     /product="high mobility group protein B1-like"
                     /protein_id="XP_017448593.1"
                     /db_xref="GeneID:108350839"
                     /db_xref="RGD:11440908"
                     /translation="MGKGYPKKPRGKMSSHAFFVQTCREEHKKKHLNASVNFSEFSKK
                     CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNALKRPPSAF
                     FLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWTNTAVDDKQPCEKKAAKLKEKYEKDIA
                     AYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDEDEEEEEEENEDEEEEEDDDE"
ORIGIN      
        1 tattaattgc atatatatag tccaacttgg taatcttgat gtgtatctgt atttgataaa
       61 tggcttcaca ttcttcagga ttaaaggtag ctctgtaaaa tagtacagag cagtgaccaa
      121 aactatcaaa ttcatctcat gatctctgga tgccggcaag ctcccagaaa gtttacaact
      181 caaaaatgtg acttccatat tcatataaca gttcctaagt tgcctgaaat ttttcatttt
      241 ttctttctta ttgttttttt aattatttac ttttcaaatg ttgtccccct tcccagtttc
      301 ccctccacaa ttcccctatc acctcgcctt ccctgtatat aagtggatat tagtcaaaag
      361 gaagttcaga agatccatga taaaactgac aagttttcaa agtagtttat ttctctttca
      421 aagggcgtga caaatataat gaagtctcct catgtaagtt ctctttattt gtttgggaga
      481 cttggcctct taattttgct tcttattgcc atgattactt aaaatattta tatatcagca
      541 caaaacataa aaaattgaaa aacaaatata attacataaa attgtttagg tatatattaa
      601 cagtatagtc agtagtaaca tagataagca tcgagtgttt gctatgagcc agctgctata
      661 gttcatttca ccttcccaaa tactgactag aagcaggtat tattactatt attatttata
      721 taggacaaat cttaaaaaga aaaacttctt tcaccaacaa ctttctcagt tgccaatcag
      781 tcctcaccca ctgatttttt tccttcaaat gtgaacccat cttcttctta ttactaatat
      841 tacttcttgt tgctttttgt ttgtagtaaa ataagaataa aaaagatttt tcttctctga
      901 attcaagtgt ttcaaatagt aaataaattg gtagactttt gtaaatggaa agatctgttc
      961 tgttatatat agttttgaat tgtgttcatt gacaatgttt taaagccata aagagggatc
     1021 actattgtct gtacctctga gatatatgtc actgaataat ttgcaaaatt tagaatatta
     1081 atatgccaat gaaccttgta gaaataaatt gtatattata atcaccatcc ttaagaaact
     1141 tgtataagaa agatttgcat atttcaatgt tcatacacac tatagtggtg tataagaaaa
     1201 taattagaaa taataaatca tttctataat tgaaatcata tttaaatgaa gatagaaccg
     1261 tttaggcttg atgaagcaca gacataaggt ttgtgcagac ataaaccttc ccagtcattt
     1321 taagaataat tttaaaaata tcacaaatat tcctgggtat gaggtgtttt tgttttaatc
     1381 atagaatctg ataagaacaa atatagttaa aaacatttga tatggcgtct ggctcccgct
     1441 ctcacaacca ttgcagtaca tcgagctcca tagagacagc gccggggcaa gcgagcaccg
     1501 gaacgggcac tgggcgactc tgtgcctctc aactaaaatc aactaaatca tgggcaaagg
     1561 atatcctaag aagccgagag gcaaaatgtc ctcacatgca ttctttgtgc aaacctgccg
     1621 ggaggagcac aagaaaaagc acctgaatgc ttctgtcaac ttctcagagt tctccaagaa
     1681 gtgctctgag agatggaaga ccatgtctgc taaagaaaag gggaaatttg aagatatggc
     1741 aaaggctgac aaggctcgtt atgaaagaga aatgaaaacc tacattcccc ccaaagggga
     1801 gaccaaaaag aagttcaagg accccaatgc cctcaagagg cctccatcag ccttcttctt
     1861 gttctgttct gagtaccgcc caaaaatcaa aggcgagcat cctggcttat ccattggtga
     1921 tgttgcgaag aaactaggag agatgtggac caacactgcc gtggatgaca agcagccctg
     1981 tgagaagaag gccgccaagc tgaaggagaa gtatgagaag gatattgctg cctacagagc
     2041 taaaggaaaa cctgatgcag cgaaaaaggg ggtggtcaag gctgagaaga gcaagaaaaa
     2101 gaaggaagag gaagacgatg aggaggatga agatgaggag gaagaggagg aagaaaacga
     2161 agacgaagaa gaagaagaag atgatgatga ataa
//
