LOCUS       XM_039109013            3149 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC108350834
            (LOC108350834), transcript variant X1, mRNA.
ACCESSION   XM_039109013
VERSION     XM_039109013.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3149
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3149
                     /gene="LOC108350834"
                     /note="uncharacterized LOC108350834; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 24 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:108350834"
                     /db_xref="RGD:11406136"
     CDS             614..1258
                     /gene="LOC108350834"
                     /codon_start=1
                     /product="uncharacterized protein LOC108350834 isoform X1"
                     /protein_id="XP_038964941.1"
                     /db_xref="GeneID:108350834"
                     /db_xref="RGD:11406136"
                     /translation="MSLLLQVRELFLGNTATITSERHISVSGCYFPSTDGQMEALFFI
                     YQLLFLKKYVRRSVMGSQGMCATEVRTHPECGLSLPSHDPQLKSQLLPWNAEMNPGAA
                     ASVRGEGKQNKTRCSARGSLSIHGKTECLHKWLRRTVMCYRMKPCLNRKVLGCCKKGP
                     TGLERWPMVKNTGCCSRGSRLNSQHLHGSSQLSVTPIPEDTATLTQTYMKCLSY"
ORIGIN      
        1 taacacacac acagacacat atacacacac agacaacaca cacacagaca catacacaca
       61 gacacacaca cagacaatac acacacacat acacacacac agacacacac acacacggtg
      121 gaaagggatt gagacaccct ctgcatacat atgtgcacaa atacacatac acacgtacac
      181 aagcattcat catatttcat tataattgct catttgggat tgtgccttat tgcacttcct
      241 tagcatctac aggctgtatt ttagcatcat agttccttaa taggtgttta ttatatgagt
      301 caaggtttct tggcacttgt atttcagttt caagttttta ttctgtctgt ttgcctgtgt
      361 gcttgctgat ttttttcagt gccaaggaca ggtagaatac ccagggactc aaaacacact
      421 agacaagtag tctagcattg caccatcccc tccccaccac accagcctgc ttctgtttct
      481 caattagccc tagccgcttc ttccttgggg tgaaacgtgg gcagtttgag ctcaatgtag
      541 aatacagggt ttgctacaat gaaatgtaat ttttttccct aaggaactgc tctcttagga
      601 atgggtttca gatatgtcac ttctgttaca ggtccgagag ttgtttttag gaaacactgc
      661 caccattacc tccgagaggc acatcagtgt cagtggttgt tattttccat ctacagatgg
      721 ccaaatggag gctctctttt tcatttacca attactcttc ttaaagaaat acgtgaggag
      781 gagcgttatg ggttcccaag gaatgtgtgc cactgaagta aggacccacc cagaatgtgg
      841 gctaagcctc ccctctcatg accctcaact gaaatcacag cttttgccat ggaatgcaga
      901 gatgaatcct ggggcagcag cgagtgtgag aggagaaggg aagcagaata agacaaggtg
      961 ttctgccaga gggagcttga gtatccacgg aaagacggaa tgcctgcaca agtggcttcg
     1021 cagaacagta atgtgctaca ggatgaagcc atgcctcaat aggaaggttc ttggatgctg
     1081 taagaaggga ccgacgggac tggagagatg gcccatggtt aagaacactg gctgttgttc
     1141 caggggatcc aggttgaatt cccagcacct acatggcagc tcacaactgt ctgtcactcc
     1201 aattccagag gatacggcca ccctcacaca gacatacatg aaatgtctga gctactgaag
     1261 ggagataaag ttgcatgctg gttaaatggc ttctagctgt gagtgcaaac atggaaatgt
     1321 actgagccat tgcaatgagg aagctgcttc tcgaacctaa gaaggctgca gcagagctgc
     1381 gggcaagttc ctgaagcagc tgaggtcatt cacccttctc gctggctcag gcccggcctt
     1441 cagcaagatt aagatttgga tttggaaaac ctgagtgaca catcaagaca aaaacaatgt
     1501 gataagaaat tttctttctc ctcttgtttt ccctgtgtct ggagtttctt caagaacatg
     1561 aaatgagaga gaaaaccata acttaaaggt attgagatat gagaacattt tgagaaggca
     1621 cttgggtggc gctctgtctg taactgaacc ttgcctgtgc ttggctggca ctccctttac
     1681 agcacgcaga gtcttgaggt ccaaagcccc tcttcctgca aaatggttat cctggtggca
     1741 ttgctctaaa tagaaggact taggtagggt aaacaggagg attgtgagca agccttaagg
     1801 tttctgatca ctagaaaagc agatctttta agagggttta ccaggaacct cagcctttaa
     1861 cctttcctgc aaaggtcagc taccacaggc atgggcatct agttcctgct cagtcctgat
     1921 ggcctgtatc agctcaagtc cccaccccga tgactgtcat atctgcttgg tttcccacca
     1981 ttttgctttt ctctctacct tggcagtttg agccccagtg aatctttctt tctgcccata
     2041 gaccagtcta gttcagtaat ttctctgccc cgagtctcag gtattaatct gcgaggacgg
     2101 cctccatctg gggacttttt tctgttctca gtgaagtggc acattcagtt cctggtgcag
     2161 cgtccgttcg tttcttttag tcatttcaca gctgtttgct gggaggagca agactgaact
     2221 acttggggct gatttcacaa ggaagctgaa aacaaggcct tcccagttcc cgtttgtgat
     2281 tttcaagtca ataaagcatg tctgtcttgg tggatgtttc tctctaactg gcttcagttg
     2341 tctgctgagc tgtctacctg gcttcccctt ggctgggaaa cctcggtttg tggccatcct
     2401 gttacaggtg gatggctgcc cggctgccca ccgttgtttg ttattaaatt ggtgatgcaa
     2461 tttctgtttg gcagtttgtg actgcaaggt tattcaagga tgctgtttag aaatacaagt
     2521 gagctacaga acgagatgtc ggagcggatg gtcggtttgt tatgtttttt tctttttttt
     2581 tttaaggctg ttcagggaca gtagacgaat gcacaaattt gttattgtgg attgttatga
     2641 atcccaaaga cgcacatacg gggatcatta ttgtagattg gcttgtgaca gctggccctg
     2701 atttacttat ttcctcaaga agacactttg aacaattatt gaaatgcctc ccctctgtaa
     2761 ttataataat aatgatgatg attttgcaac tgaatatgca attcagggcg tacacactca
     2821 actgttttta gcttgtttct ctttttacat tgatgtcagc tgctgtcttg gcttgtgaag
     2881 agctgagaag gactttccaa ccaagggtca atgagctaca tgaagagtca tctgtggcca
     2941 acccgggaaa ttactaaaat aataatttta gtaatataca ttacaataca ataatattac
     3001 agttagtatg taaggagcaa gctaactatg ggcagggttc ttttttctcc tttttggggg
     3061 cctttggaga agaaacctat ttttagtact tatctgctct taagattaaa aataatgtat
     3121 cttattgaat aataaaatta caaatgttt
//
