LOCUS       XM_039106442             619 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus DNA polymerase epsilon subunit 4
            pseudogene (LOC108350599), mRNA.
ACCESSION   XM_039106442
VERSION     XM_039106442.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106442.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..619
                     /gene="LOC108350599"
                     /note="DNA polymerase epsilon subunit 4 pseudogene;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:108350599"
                     /db_xref="RGD:11509734"
     CDS             4..486
                     /gene="LOC108350599"
                     /codon_start=1
                     /product="DNA polymerase epsilon subunit 4-like"
                     /protein_id="XP_038962370.1"
                     /db_xref="GeneID:108350599"
                     /db_xref="RGD:11509734"
                     /translation="MGASVLLRRENKGKGARVMCACSEIECSMFSEATVAVAAAGSGM
                     PKEEKAPEGEAAALQVQALMSAHCLALVLGVGIGGVTSGGCLWDSKGLAKANSDVMLA
                     GQEAIFILARVLELFVETIAKNAYCCAQQGKRKTPQRRDLDNAIEAVNEFTFLEGTLD
                     "
ORIGIN      
        1 aatatgggtg cttcagtcct tcttagaagg gagaacaaag ggaaaggggc cagagtcatg
       61 tgcgcatgtt cagagattga gtgtagcatg tttagtgagg cgacggtggc agtggcagct
      121 gcagggagtg ggatgcccaa agaggagaag gctcccgaag gggaggcagc agctttgcag
      181 gtccaagccc tgatgagtgc acactgccta gcattggtgc ttggagtggg tattgggggt
      241 gttacctctg gaggctgcct ctgggacagt aaaggacttg ctaaagcaaa ctctgatgta
      301 atgctggcag gtcaggaagc catctttatc ctggcacgag ttttggagct gtttgtggaa
      361 actattgcaa aaaatgccta ctgctgtgct caacaaggaa agaggaaaac tccccagagg
      421 agagatttgg ataatgcaat agaagctgtg aatgaattca cttttctaga aggcactttg
      481 gattgatcgt ggagctggat gactttgcga acctttgctg tatcagtctt ctttaccccc
      541 tgtaagcctc aactttggag agagtctgca catgtataca atcttcttgt tctactttta
      601 cccaagatag aagaatcag
//
