LOCUS       XM_039106459             341 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L35a pseudogene
            (LOC108350427), mRNA.
ACCESSION   XM_039106459
VERSION     XM_039106459.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..341
                     /gene="LOC108350427"
                     /note="60S ribosomal protein L35a pseudogene; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 long SRA read, 13 Proteins, and 88% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:108350427"
                     /db_xref="RGD:11430655"
     CDS             2..334
                     /gene="LOC108350427"
                     /codon_start=1
                     /product="60S ribosomal protein L35a-like"
                     /protein_id="XP_038962387.1"
                     /db_xref="GeneID:108350427"
                     /db_xref="RGD:11430655"
                     /translation="MSGRLWCKAIFAAYKRGLRNQREHTTLLKIEGVYARDETEFYLG
                     ERCAYVYKAKNNTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIR
                     VMLYPSRI"
ORIGIN      
        1 tatgtctgga aggctatggt gcaaggccat ttttgctgcc tacaagcgag gcctcaggaa
       61 ccaaagagag cacacgactc ttcttaaaat tgaaggtgtt tatgcccgag atgaaactga
      121 gttctactta ggcgagaggt gtgcttatgt gtacaaagca aaaaacaata cagtgactcc
      181 tggaggcaaa ccaaacaaaa ccagagtgat ctggggaaaa gtaactcggg cccatggaaa
      241 cagtggcatg gttcgtgcca aattccgaag caaccttcct gctaaggcca ttggacacag
      301 aatccgtgtg atgctgtacc catcccggat ttaaactagt a
//
