LOCUS       XM_039103564            3981 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 737-like
            (LOC108350175), transcript variant X1, mRNA.
ACCESSION   XM_039103564
VERSION     XM_039103564.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103564.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3981
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3981
                     /gene="LOC108350175"
                     /note="zinc finger protein 737-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 3 ESTs, 16 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     129 samples with support for all annotated introns"
                     /db_xref="GeneID:108350175"
                     /db_xref="RGD:11447466"
     CDS             139..2256
                     /gene="LOC108350175"
                     /codon_start=1
                     /product="zinc finger protein 420-like isoform X1"
                     /protein_id="XP_038959492.1"
                     /db_xref="GeneID:108350175"
                     /db_xref="RGD:11447466"
                     /translation="MEGLLSFRDVAIDFSAEECECLDLAQWSLYRDVMLENYSNLVFL
                     GLAFSKPYLVTCLEQRKEPWNVKEPATVAVYPGSKPYIFKECGKTFPWNSLLIQHHKI
                     HPGAKLYTCDECGKSFNVRSTLYKHHRTHTGEKPYKCKECGKAFTCSSSLNQHHRIHT
                     GEKPYKCECGKAFNNSSALTQHQRIHTGERPYKCDECGKAFNNCSARTRHQRIHTGER
                     PYKCAQCGKTFNFPTSLSQHQRIHTGEKPYKCEECGKAFNCSSHLKQHRIIHTGKKPY
                     KCKECSKAFNCSSSLNQHRRIHTGEKRYICEECGKAFNNCSALTQHQRIHSGEKPYKC
                     EECGKAFYNCSALSRHQKIHTGEKPYKCADCGKAFIFRSSLSQHQRIHTGEKPYKCKE
                     CGKAFNCSSHLNQHGRIHSGEKPYKCEECGQTFICSSYLHKHQKIHAIEKLYECKDCG
                     KAFSCSSYLKYHQRFHTGGKSYTCKECDKTFRSSSYLRNHQRFHTGEKPYTCKECGKA
                     FVNSSSLLVHQRIHTGEKPYKCKECGKAFRCSSYFKYHQRLHTGEKPYTCKECGKAFA
                     KSSCLILHQRIHTGEKPYKCAECGQAFICSSYLRKHQRIHTGEKPYTCEECGKAFSIY
                     STFAQHQRIHTGEKPYKCKECNKAFNNHSALIKHQRIHTGEKPYACKECSKAFNNSSS
                     LIRHQRIHIGIETLEIQGIWQGL"
ORIGIN      
        1 ggcaacgtca cagacaggga ctctgggaaa ggcgcttccg cgtttcttct gcgcctgtgt
       61 gtctcttgct ctctggccct cttttccaaa gttgggccag tgcctggtcc tgtgggcgct
      121 ctggtagcat ctcttgacat ggagggactg ctctccttca gggatgtggc cattgatttc
      181 tctgcagagg agtgtgaatg cctagacctt gctcagtgga gtctgtacag ggacgtgatg
      241 ttggagaatt atagcaacct tgtgttcctg ggtcttgctt tctctaagcc gtacttggtc
      301 acatgcctcg agcagagaaa agaaccctgg aatgtgaagg aaccagcaac agtagctgtg
      361 tacccaggaa gtaaacctta tatatttaaa gagtgtggta agacctttcc ttggaactca
      421 cttcttattc aacaccataa aattcatcct ggagcaaaac tttacacgtg tgatgaatgt
      481 ggcaagtcct ttaatgttcg atcaacactg tataaacacc atagaactca tactggggag
      541 aaaccctaca aatgtaaaga atgtggcaaa gcttttacat gttcttcaag ccttaaccaa
      601 caccatagaa ttcacactgg ggagaaaccc tataaatgtg aatgtggcaa agcctttaat
      661 aattcttcag ctcttactca gcaccaaaga atccatactg gagagagacc atacaagtgt
      721 gacgaatgtg gcaaggcgtt taacaattgc tcagcacgta ctcgacacca aagaatccat
      781 actggagaaa gaccctacaa gtgtgcacaa tgtggcaaga cgtttaattt tcccacatca
      841 ctttctcagc accagagaat tcatactgga gaaaaaccct acaaatgtga agaatgtggt
      901 aaggccttta actgttcttc acatcttaaa cagcaccgaa ttattcatac tggaaagaaa
      961 ccctacaaat gtaaagaatg tagcaaagct tttaactgtt cttcgagtct taaccaacac
     1021 cgtagaattc acactgggga gaaacgctac atatgtgagg aatgtggcaa agcctttaat
     1081 aactgttcag ctcttaccca acaccaaaga attcatagtg gagagaaacc ctataaatgt
     1141 gaagaatgtg gcaaagcctt ttataattgc tcagcccttt ctcggcacca gaaaattcat
     1201 accggagaaa aaccatataa atgtgcagat tgtggcaaag cttttatttt tcggtcatca
     1261 ctctctcaac accagagaat tcatacagga gagaaaccct acaaatgcaa agaatgtggc
     1321 aaggccttta actgttcttc tcaccttaac cagcatggaa gaattcacag tggagagaaa
     1381 ccttataaat gtgaagagtg tggccagacg ttcatctgtt cttcatacct acataagcat
     1441 cagaagattc atgctattga gaaactctat gagtgcaaag actgtggtaa agccttcagc
     1501 tgctcttcat accttaagta tcaccagaga tttcatactg gaggaaaatc ctacacgtgc
     1561 aaagaatgtg acaaaacctt taggtcatct tcatacctta ggaatcatca gagatttcat
     1621 actggagaga aaccttacac gtgcaaagaa tgtggcaaag cctttgttaa ttcttcaagc
     1681 cttcttgtac accaaagaat tcacactgga gagaaaccat acaaatgcaa agaatgtggc
     1741 aaggccttta ggtgttcatc atattttaag tatcatcaga gacttcatac tggagagaaa
     1801 ccctacacat gcaaagaatg tgggaaagcc tttgctaaat cttcgtgtct tattctacac
     1861 caaagaattc atactggaga aaaaccctac aaatgtgcgg agtgtggcca ggcatttatc
     1921 tgttcttcat atctgaggaa gcatcagaga atccatactg gtgagaaacc gtacacatgt
     1981 gaagaatgtg gcaaagcttt tagcatttat tcaaccttcg ctcaacacca gagaattcat
     2041 actggagaaa aaccatataa atgcaaggaa tgtaataaag catttaataa tcattcagct
     2101 ctaattaaac atcaaagaat tcatactgga gagaaaccct atgcatgcaa agaatgtagt
     2161 aaagctttta ataatagctc gagccttatt cgacatcaac gaattcatat tggaattgaa
     2221 accctagaaa ttcaaggaat ttggcaaggc ctttagtaat agtttaacac ctagctccaa
     2281 aaactcatac tagtaagaaa ctagaaatga aaaaaggtga ctacaaagtg ttctgtatat
     2341 aaatacaatg taaaaaaatc atgcatgaaa gaaagcctac aagttcaaat agtgttgcac
     2401 ctcttgtaac tcttcttcat gttttattga tagcagagaa tttgtactga ggaagcctac
     2461 acatgtaaat aatgtgtcaa ggcttttact gattgttcac tcctcatcag tgaactcata
     2521 gaaatcttat tcatttattg actttggaag gaactctgtc caggatgtat aagcaaaata
     2581 gttattctgg aagacattat gtaaacatag aatgtagtaa attaactcat acctcagatc
     2641 ttaatggata tgagagttac tgtaagtgac aaatcttgta aatatatgga ctgatgtaaa
     2701 aatgaagtaa atattgttta taagtcatgg gacattattt aatgtggtag aataaatcat
     2761 agacatcaca actcagtaag gatatgaatt tagtaataaa accttagttg ctatgtaaat
     2821 ttacatattc atgtttgaaa agagaagtta gcacaattct cagacagtca aaaaaacaag
     2881 actagttcct aattgatttt agtatagttc tttttcctca gagacaatag aataggtaca
     2941 aaatagaggt tgtgcgtgaa acttacatct ttaaataaac aaatttgaat ggttcataat
     3001 gtagtgtata tgtttttatt gggtaacatt attctataag agaggttaaa atattccacc
     3061 ttactaaagg tggtaggtga caggtttcag atatatacgg ctgaaaatta ttcgtgtaag
     3121 tgatcattct attccagatg ccagtcagtg tctttcaaag tatttggagg atattatttc
     3181 aatatgttac atatttgttc atccccttct tgtggtaact gtgttaatta agtgggtaat
     3241 tatgccttag ctttctgaat cttgaattgt attactatta gtcagttttt actaaatgca
     3301 tatatacata tttgagaatg gtggcatggc tactgactat atagacatta tgtagtatac
     3361 atgccatcct ttgacatata aaacccactc aaattttgat atttactaca ttgactgaaa
     3421 tattcctact tttacaatca aataaacatt aggaattaag agaacatttg gagcaccatg
     3481 tgtatgttct tgcttgtacc tgtacctggt ctgactggcg ggatttgata tattttcaca
     3541 gaaaccctgt cctcctctgt ttccttcaag ctattgctac agtgattctc aagaaattag
     3601 aatttctctg agatcctgct gggagaaaca aaagtcctgg ggcatccata ggaggtccgt
     3661 accttttgga gaaagactta gtttatataa tagctttact ggaaagacta atcttgaagg
     3721 aaagatgtgg ggctgtgact gtggtgggca gtagaccatg cttggttgga ttagactgct
     3781 tagttgtgtt tttcttttac cttctattta ttgtattata tttattttta tatttattat
     3841 atatattaca tgtaagtata ttatttattt atctaatgcc ctgacattgt ttgaggattc
     3901 taaagatgga ctggcaagtt attgtatctc cttttccctt tttccagtgt ggttacattg
     3961 aataaatctg ttttttaata a
//
