LOCUS       XM_039097462            1500 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus kallikrein-1E2-like (LOC108349762),
            partial mRNA.
ACCESSION   XM_039097462
VERSION     XM_039097462.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            <1..1500
                     /gene="LOC108349762"
                     /note="kallikrein-1E2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins, and 84% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:108349762"
                     /db_xref="RGD:11400164"
     CDS             <1..1092
                     /gene="LOC108349762"
                     /codon_start=1
                     /product="prostate-specific antigen-like"
                     /protein_id="XP_038953390.1"
                     /db_xref="GeneID:108349762"
                     /db_xref="RGD:11400164"
                     /translation="WSSTPCPFTSTGKFFFPIHFPPNAVPYPELLSAGAFPLVQSRIL
                     GGWECERHPQHWQVAVYHYDKSVGDGEEHPSPTPVGTHSCPVHPRYLFDHLSLWPLTP
                     WCPCFSHSVSPSPSLSCQYFPALSAVHSLFPHPFLLSFSLLSRFPACSSPSSLLRPSH
                     NKVRLGQHSLDTDGDTGQDVPVRHSIPHPLCNRSLRIPTFLSPDADNSQDLMLLQLRE
                     PANTTEAVCDKPAHGPGSAVLEEQARQLSSCIPVMVVFSRPTALSAKMLQCVDLTLMS
                     IDVCTDSYSQRVTEFILCARQRYLHGFSTCGHLFLCIFMVPMTILDPEQPTGDSGGPL
                     VCGGALQGIVSWGDVPCDTTTKPGVHTKV"
ORIGIN      
        1 tggtcctcta ccccatgtcc cttcacatcc acaggaaagt ttttcttccc aatccatttt
       61 ccacccaacg ctgtgcccta cccagaactc ctttcggcag gtgcctttcc cctcgtccag
      121 tccaggatcc ttggaggctg ggagtgtgag agacatcccc aacactggca ggtagctgtg
      181 tatcactatg acaagtctgt tggggatggt gaggagcatc ctagtccaac cccagtggga
      241 actcacagct gcccagtgca tcccaggtac ctctttgacc atctgtcact atggcctctc
      301 acaccctggt gtccctgctt ttcccattct gtgtctccgt ctccctccct ctcctgccag
      361 tactttcctg ctctctctgc tgtccattct ctctttcccc atccatttct cctctcattc
      421 tcccttttgt ccagattccc tgcatgctcc tccccctcat cactgcttcg tccctcacat
      481 aacaaggtga ggctgggtca gcacagcctg gacactgatg gagacactgg ccaggatgtc
      541 cctgtccgac attccatccc acacccactc tgtaacagga gcctccgaat acccacgttt
      601 ctcagcccgg atgctgacaa cagccaggac ctaatgctgc ttcagctgag ggaaccagcc
      661 aacaccacag aggctgtgtg tgacaagcca gcccacggac caggaagtgc ggttctggag
      721 gaacaggcca ggcaactgag ctcctgtatt cctgtcatgg ttgtgttctc tcggcccaca
      781 gctctaagtg caaagatgct gcagtgtgtg gacctcaccc tcatgtccat tgatgtctgt
      841 acggactctt attcacagag ggtgacagaa ttcattctgt gtgctagaca gagatacctg
      901 catggcttct caacatgtgg acaccttttc ttatgtatct tcatggtacc tatgaccatc
      961 ctagaccctg agcagccaac aggtgactct ggaggaccct tggtctgcgg gggtgccctg
     1021 cagggcattg tatcctgggg tgatgtccct tgtgatacta ccaccaagcc tggagtccac
     1081 acaaaagtct gaagctacat ggagtggatc tggaaaaata tgagaaggaa ctgaatcatt
     1141 ggcccaccat ttacaccctc aaggaccacc tcagactctg actaagaatc cccagtagta
     1201 gtcctctcct acttcctact gcaaggggct ggccgtcttg gacatgcgct catgaaccac
     1261 ctaaccaatg actacatctt ccttctccca tgtccttttc ttctcatggt ctctgcctga
     1321 aaccccaagc ccaggaactt ccaggcctgc ctatctctct tctgcctaca ggctgtaggc
     1381 atctttatta acctatcaag gataacttgg gggcagagtt tgtacaacaa aagctgttac
     1441 attaggatct attggtcttc aatcaaccag atcttggggt acagaattta gcattgaata
//
