LOCUS       XM_039101439            1153 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L21 pseudogene
            (LOC108349708), mRNA.
ACCESSION   XM_039101439
VERSION     XM_039101439.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1153
                     /gene="LOC108349708"
                     /note="60S ribosomal protein L21 pseudogene; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:108349708"
                     /db_xref="RGD:11516969"
     CDS             768..1118
                     /gene="LOC108349708"
                     /codon_start=1
                     /product="60S ribosomal protein L21-like"
                     /protein_id="XP_038957367.1"
                     /db_xref="GeneID:108349708"
                     /db_xref="RGD:11516969"
                     /translation="MGTVQKGMPQKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKR
                     INVQIEHIKHLKSRDGFLKLVKESDQKKEEAKEKGAWVQLKRQPAPPREAHFVRTNGK
                     EPELLEPSPYGLMA"
ORIGIN      
        1 gtgatggcca gccctctgga agagcccaga agatcatgtg tggatcccag acattgaaac
       61 aaggagctgt aacacttaaa tgcctttaaa actgcaagat gttcaagatg ttcaagagct
      121 gtgggctacc tgctgaggag ggctgctgac agggagtgaa cagggagtgg accagcccag
      181 gaggataaaa ggttttacag tcaacacaga tgaaaaagta gttggagacc tgattacacc
      241 ttgacatcag ccatggagat gcagagtttg gagcttgccc agctgggttc ctgtcttgct
      301 ttggggatta cagttaagtg attggatgaa tctcagaaga gactttgaac tttggacttt
      361 taatattatc gagactgcta tagactacga ggacttttga agttgaacta aatgtatttc
      421 ttattatgct atggctagat atggccccca tagacttatg agttcggaca agcttattgg
      481 ggccagggag tagaatgtaa tggtttgtat atgctggatc cagggagtgg cactattaga
      541 gggtatggcc ttgttggagt aggtgtgtca ctgtgtgggc tttaagacac ttgtcctagt
      601 ccgccggggc agccatcttc ctgtaactcg ccaaaatgac gaacacaaaa ggaaagagga
      661 gaggtactca atatatgttc tctagatctt ttaggaaaca tggagtcgtt cctttggcca
      721 catacatgcg aatctataag taggatgata ttgtagacat caagggaatg ggcactgttc
      781 agaaaggaat gccccagaag tgttaccacg gcaaaaccgg aagagtctac aatgtcaccc
      841 agcatgccgt gggcatcatt gtaaacaagc aagttaaagg caagattctg gccaagagga
      901 tcaatgtgca gattgagcac atcaagcacc tgaagagcag agatggcttc ctgaagctgg
      961 tgaaggagag cgatcagaag aaagaggaag ccaaagagaa gggtgcctgg gttcagctga
     1021 agcgccagcc tgcgccaccc agagaagcgc actttgtgag gactaacggg aaggagcctg
     1081 agctgctgga gcccagtcca tacggactca tggcctaatg gacacaaagg aaagaaagga
     1141 cccggactgc aaa
//
