LOCUS       XM_039100938            1664 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC108349570
            (LOC108349570), transcript variant X1, mRNA.
ACCESSION   XM_039100938
VERSION     XM_039100938.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100938.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1664
                     /gene="LOC108349570"
                     /note="uncharacterized LOC108349570; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 37 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:108349570"
                     /db_xref="RGD:11388338"
     CDS             935..1402
                     /gene="LOC108349570"
                     /codon_start=1
                     /product="uncharacterized protein C11orf96 homolog"
                     /protein_id="XP_038956866.1"
                     /db_xref="GeneID:108349570"
                     /db_xref="RGD:11388338"
                     /translation="MPRGVRSGRGAWAGGVLGVAAPPPPGPPPARAPRSPPASLAAAR
                     LRRGPAAPPTHPPRPRPGPAPARTVRQPPREAESPADASGILMLFSLLPVLPRCEELQ
                     SCEQAASRSASTAMKHSHLLDFPSMTDWTCKLGAKQVLLAHGSQKKVPDSLEL"
ORIGIN      
        1 ctaggagaaa ggagaacggg cagagtggtt ctggagagaa cctgaggttt tgggggtagg
       61 tgggatccga gtaccctagg tgagaagaaa ggaagacaga tgtttgggca aagaagggtc
      121 atagaatggg acctccaaaa gacctgggtt gaagagaaag gggttatcag ctagcaaggt
      181 taggagctta aggcaaggag aagaatgggg cctagaggag cgcaggccca agctggttct
      241 ccaggaagga gggtggagag acgtctgggg agagggtcag agatggctcg gattaggaga
      301 agtgcagtta gaaggccttg gaagaacagg tgtgagggag gccggcagtg gctggggagg
      361 tcctctcgag aaaagcaccg agtaagctgg agtcccaagg agacatgcaa ggaccgcagc
      421 cctggggcct gatgcgggtc caaggaaagg gggtcctggg gcagagggag aggcgggacc
      481 cgcggccaga gggaggagga tcggtgctgg ggagtgggat ctaaagctgc ctccctctcc
      541 agtcaccccc tcttggcttt cccatgttca cttcccaaac tccccggttc tccctggttg
      601 ccacggcaac cgctcctgcc aggcgcggtc accaaggaaa ccccgtgccc gcctctcccc
      661 ctccccatcg cccgcacgcc ccccggcggc ggggaggagg gcgtggggga gcggactccc
      721 gccctggtcc gcagccggtc cgccagctgc ggtcgcctcg ccgggggcgc cggtccaggt
      781 cccggcccgc atcccggtcc tgcgtctcca ttccgtccgg ccccatcctg gatccgtgtc
      841 cccatctagc cctgccccag ccccgtcctg ccccgtcccc gcgcgccacg cgctccgact
      901 caccgcgggc tccgggctcc cggcgagggg cggcatgccc cgcggggtcc gctcggggcg
      961 cggggcctgg gccgggggcg tcctcggggt cgcggctccg cccccgcccg gcccgccgcc
     1021 cgcccgcgca ccgcgctcgc cgcctgccag cctggccgcc gcccgcctcc gccgcggccc
     1081 cgccgctccc cccacccacc cccccaggcc ccggcccggc ccggcccccg ctcggacggt
     1141 gcggcagccg ccgagagaag ccgagagtcc cgcggacgcg agcggaatac tgatgctgtt
     1201 ctctctgctt cctgttctgc caagatgtga agagctacag tcatgtgagc aggctgcctc
     1261 acgctctgca agcacagcca tgaaacatag tcacctcctt gacttccctt ccatgacgga
     1321 ctggacctgc aaactgggag ccaagcaagt cctccttgcc catggaagcc agaagaaggt
     1381 gccagattct ctggagttgt agtgagctgc catgcagatg ctgtaattga acccggatcc
     1441 tcgtcaaagc agccgtgctc ttaactgctg agccatctcg ctagcctctg aagcttctat
     1501 ttaaaggcct aggagatggt ctttgggcaa ctggggtggt atgaacttgg gcttccttag
     1561 aagcatcaaa gagctgttgt cactgctgtt agatggactg ttagatgtta gacgtcatga
     1621 caggctgtgc ctcttcaaat cataaatcat acagccttct tgaa
//
