LOCUS       XM_039084952            2026 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 431-like
            (LOC108349479), transcript variant X1, mRNA.
ACCESSION   XM_039084952
VERSION     XM_039084952.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084952.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2026
                     /gene="LOC108349479"
                     /note="zinc finger protein 431-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 7 long SRA reads, and 95% coverage of the annotated
                     genomic feature by RNAseq alignments, including 76 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:108349479"
                     /db_xref="RGD:11443142"
     CDS             423..926
                     /gene="LOC108349479"
                     /codon_start=1
                     /product="zinc finger protein 120-like"
                     /protein_id="XP_038940880.1"
                     /db_xref="GeneID:108349479"
                     /db_xref="RGD:11443142"
                     /translation="MDALTYDDVHVNFTREEWALLDPSQKSLYKDVMQETYRNLTAIG
                     MKDVILERNPLKILSVVKPLHNIVISKDIKAHILERNSVNVSHVIKPLHTILSFKILK
                     EFILEEKKPYKCNQCGKGFIRCSHLQVHKRIHTGEKPYVCDRRGKAFAYHSYLQVHKR
                     IQWREAI"
ORIGIN      
        1 ggtcaccgcc cacaaaaggg aggagcaagc ggctgagcag tggtaggtgg ccatgtgggt
       61 ccttcctggg gctgggcggg gagacagatg agtagctatt ggaggacagg ctactgaaat
      121 gcaaatccct gtagatccgg aaaagatctg gctctggaat tgaagcttgg gctgagaact
      181 gtgtatgctg actgtatctt cagctcactc taactcttaa ggaggtgcta aagtcactca
      241 agactactgg ccaatcagag ttcagtggac ctgtcaatca gaagagaagg cgggcttttc
      301 cgggtgcctt gttgcaggat tcccttagta gctaagcagt tttcaatggt cctggctgct
      361 gtgctctgag tcctgcggtt ggattctgtg aggcatgctc aggcaagctc caaagttgcg
      421 acatggatgc attgacctat gatgatgtac atgtaaactt cactcgagaa gaatgggctt
      481 tgctggatcc ttcacagaag agtctctaca aagatgtgat gcaggagacc tacaggaacc
      541 tcactgctat aggcatgaaa gatgtcatac tggagagaaa ccctctgaaa atactcagtg
      601 tggtaaagcc tttgcacaac atagtcatct ccaaagacat aaaagcacac atactggaga
      661 gaaactctgt gaatgtaagc cacgtgataa agcctttaca tacgattctc agcttcaaaa
      721 tcttgaaaga attcatactg gaggaaaaaa aaccctacaa atgtaatcaa tgtggtaaag
      781 gctttatacg ttgtagtcat ctccaagtac ataaaagaat acatactgga gagaagccct
      841 atgtatgtga tcggcgtggt aaagcctttg catatcatag ttatctccaa gtacataaaa
      901 gaatacagtg gagagaagcc atatgaatgt aatcaatgtg gtaaagcctt tgtacttcac
      961 agtactctta aaacacatga aagaattcat actggagaga aaccctacaa atgcaatcaa
     1021 tgtggtaaag cctttgcacg acccagtcat ctccaaaggc atggaataac acatactgga
     1081 gagaaacctt acaaatgtga acaatgtggt aaagccttta tacgttgtag tcatctccaa
     1141 gtacataaaa gaggacatac tggagagaag ccctatgaat gtaatcaatg tggtaaagcc
     1201 tttttacttc acagtactct taaaacacat gaaagaattc atactggaga gaaaccctac
     1261 aaatgcaatc aatgtggtaa agcctttata agttgtagtt ctctccacgt acataaaaga
     1321 atacatactg gagagaagct ctatgaatgt gatcaatgtg gtaaagcctt tgcatatcaa
     1381 agttatctcc aagtacataa aagaatacat actggagaga aaccttacaa atgtaatgaa
     1441 tgtggtaaag cctttgtatg taatgctagt ctccgaaaac ataaagcaac acatactaca
     1501 gtgaaagctt atgaatgtaa gtaatttagt aaattccttg cctctcatga tcaactttga
     1561 caacatgaaa gaattcatac tggaaagaaa ccttacaaat gtagtcaata tggtaaagca
     1621 ttttcacaat caagccacct ccaactacat aaaagaacac atacatacta aagagtaacc
     1681 ctatgaatgt aaccaatgta gtaaagcctt tactgtgatc ttcaaaggta cggtggttta
     1741 aatatacttg gcccatggca agtggcagtg ttaggaggta tggccttttt ggagtagatg
     1801 tggcctttga ggaagtatgt cactgtggag gggggatggg ctttgagacc ccatgcttaa
     1861 actctgccca gggcagaaga gtcttctggc tgccttctga tcaagatata gaactctctc
     1921 cagcatcatg tctgcttgga cactgacatt ccttccacct tgataataga ctgaacctct
     1981 gaatctgtat acctcccctc cccccaatta aatgtccttc ctaaga
//
