LOCUS       XM_006227725            1303 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC108349468
            (LOC108349468), transcript variant X1, mRNA.
ACCESSION   XM_006227725
VERSION     XM_006227725.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006227725.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1303
                     /gene="LOC108349468"
                     /note="uncharacterized LOC108349468; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 3 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:108349468"
                     /db_xref="RGD:11387570"
     CDS             253..651
                     /gene="LOC108349468"
                     /codon_start=1
                     /product="zinc finger protein 548-like isoform X1"
                     /protein_id="XP_006227787.1"
                     /db_xref="GeneID:108349468"
                     /db_xref="RGD:11387570"
                     /translation="MAEAPVNQGESYVSLEDVCLRFTAEEWGLLDDAQKLLYHNVMLE
                     NFSLVLSLGLPISKSFPGRHNEGSLRERKEQQTWPLGASGNISAEDCQALSGQLTLHF
                     SPEEGTQVYPSWPYLFQKDKHTTVEPSINI"
ORIGIN      
        1 ttccctgaag cctcatgcaa ggaccgctgc tgctccgggg tttgcagcac gctatggcag
       61 gggtagggtg ggatttccgg tgacgtcacc acagaatgtc cgttaaagcg agggttttgg
      121 tgagggttct ggaagtgggg gctaaggtgg gtggcctctg cagcgtgtgg ctgtgtgacc
      181 cgacacaggt ggcctcccag ctgaggtcga gaacccattg agcggctagg cctccacgta
      241 tgcacagacc caatggcaga agcacctgtg aaccaaggcg agagctatgt gagcctggag
      301 gatgtgtgcc tgcgcttcac tgcagaagag tggggtctcc ttgatgacgc ccagaagctc
      361 ctgtaccaca acgtgatgct ggagaacttc tcgcttgtgc tgtccctggg acttccgatt
      421 tccaaatcct tcccaggcag gcacaacgaa ggaagcctca gggaaagaaa ggagcagcaa
      481 acttggcctc ttggagcttc tggaaatatc tctgctgagg actgccaagc cttgtcagga
      541 cagctgactc tccacttctc ccctgaagaa ggaacccaag tttatccatc atggccttat
      601 ttgttccaga aagataaaca tacgactgtg gaaccatcca tcaatattta gagaattgag
      661 aagaattcat agaggaaatt aaattttgct gaggaagtga aagatatgtc ttcattttta
      721 taaggcgcca gtattcttca caagctctcc aataaaactc ttatttccca tttaaaggag
      781 aaaccatata actctgttta gaaacctctt ccttaaataa tctcctaact ctttagtgag
      841 ggataaaggc agcaataagt accatttata gagttctgtg atggtctggc attactgtaa
      901 acaattaggt acattatttt atccacgttt tcccagcagc ctccacagtt attagctctg
      961 ttttataggt caagaaaatg agactcggaa aggttctata ccttgtggtc atgtgtaacc
     1021 aaaatgctgg gctacagtgc gaatgcagcc tggttctcca accttccctc tgaaacatct
     1081 ttctaacagc atgcagtgta tatgcagtct gatccattgt ctgcacgcac agatctgtga
     1141 gttgtggaag gcacttatta ctagagggaa atcaccacca cgatccagac gtgaggaggt
     1201 tcccaggctc aaaaatgttc ttttgtggtc ctttgtgctc agcccttgac aactactgct
     1261 cagctttctt ggctcaaata tgacataaag atcataaagt atg
//
