LOCUS       XM_039101055             522 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L35a pseudogene
            (LOC108349446), mRNA.
ACCESSION   XM_039101055
VERSION     XM_039101055.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039101055.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..522
                     /gene="LOC108349446"
                     /note="60S ribosomal protein L35a pseudogene; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 1 long SRA read, 19 Proteins, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:108349446"
                     /db_xref="RGD:11501622"
     CDS             142..474
                     /gene="LOC108349446"
                     /codon_start=1
                     /product="60S ribosomal protein L35a-like"
                     /protein_id="XP_038956983.1"
                     /db_xref="GeneID:108349446"
                     /db_xref="RGD:11501622"
                     /translation="MSGRLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLG
                     KRCAYVYKAKNNTVTPGGKPNKTRVIWGKVTWAHGNSGVVRAKFRSNLPAKAIGHRIR
                     VMLYPSRI"
ORIGIN      
        1 gctgggtcta tttctgctcc tgactttgca tcgccctgat taactagaat agtctgctca
       61 taagaagccc aagaagggct ctttccacca tcttggcgca tttggaggcc tgctgggaac
      121 aggacttcta aaaaaacaag tatgtctgga aggctgtggt gcaaggccat ttttgctggc
      181 tacaagcgag gcctcaggaa ccaaagagag cacacggctc ttcttaaaat tgaaggtgtt
      241 tatgcccgag atgaaactga gttctactta ggcaagaggt gtgcttatgt gtacaaagca
      301 aaaaacaata cagtgactcc tggaggcaaa ccaaacaaaa ccagagtgat ctggggaaaa
      361 gtaacttggg cccatggaaa tagtggcgtg gttcgtgcca aattccgaag caaccttcct
      421 gcaaaggcca ttggacacag aatccgtgta atgctgtacc catcccggat ttaaactaat
      481 ggagagtaaa taaaagtaaa aaaaaaaaaa aaaaaaaaaa aa
//
