LOCUS       XM_017602407             688 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus high mobility group protein B4-like
            (LOC108349258), mRNA.
ACCESSION   XM_017602407
VERSION     XM_017602407.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017602407.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017602407.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..688
                     /gene="LOC108349258"
                     /note="high mobility group protein B4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 7 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:108349258"
                     /db_xref="RGD:11417756"
     CDS             127..633
                     /gene="LOC108349258"
                     /codon_start=1
                     /product="high mobility group protein B4-like"
                     /protein_id="XP_017457896.2"
                     /db_xref="GeneID:108349258"
                     /db_xref="RGD:11417756"
                     /translation="MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRK
                     CSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYTGPRRERRRRDPDAPRKPPSSFLL
                     FSQDHFEEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAY
                     YHQCQRGE"
ORIGIN      
        1 gccctggctg aggcacacac agagggaaga tttcacccca tggaggacac tgtctaggct
       61 gctcctgtag tgaagaccaa tcgctgctct ccaatcagca ggatcggaat tcgtgcttct
      121 ataaacatgg gaaaagacag caaagtaaga ccgaaagtga acgtctctcc ttatgtccat
      181 tttatgatgg acttcagaaa tcaaacaagg gagcaacagc caaacaccta ttatgatttt
      241 accgaatttt ctagaaagtg ttctgaaaaa tggaagacca tctcaaagaa ggaaaaaaag
      301 aagtatgaag ccctggccaa gcgcgacaaa gatcggtacc aacgtgaaat gagaaactat
      361 accggaccga gaagggagag aagaaggaga gatccagatg caccgcggaa gccaccatcc
      421 tcgttcctgc tcttctccca ggaccatttt gaggagataa aagaacaaca cccaaactgg
      481 actgtggcgc aggtggccaa ggctgcaggg aggatgtggg ccaggtgttc agaagcggat
      541 aaaatcccct acgaggagag ggctgcggtt ctgagggcca agtaccttga agagcgggag
      601 gcctactacc accaatgcca gcgcggggag taaaacttca agggatgggg caaacccagt
      661 ctgaaacaat aaacctcatt caactggc
//
