LOCUS       XM_039096348             451 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L35a pseudogene
            (LOC108348509), mRNA.
ACCESSION   XM_039096348
VERSION     XM_039096348.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..451
                     /gene="LOC108348509"
                     /note="60S ribosomal protein L35a pseudogene; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 2 ESTs, 32 long SRA reads, 13 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 168 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:108348509"
                     /db_xref="RGD:11442307"
     CDS             57..389
                     /gene="LOC108348509"
                     /codon_start=1
                     /product="60S ribosomal protein L35a-like"
                     /protein_id="XP_038952276.1"
                     /db_xref="GeneID:108348509"
                     /db_xref="RGD:11442307"
                     /translation="MSGRLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLG
                     KRCAYVYKAKNNTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRRNLPAKAIGHRIR
                     VMLYPSRI"
ORIGIN      
        1 cgccatcttg gcgtctttgg aggcctgctg ggaacaggac ttctaaaaaa acaagtatgt
       61 ctggaaggct gtggtgcaag gccatttttg ctggctacaa gcgaggcctc cggaaccaaa
      121 gagagcacac ggctcttctt aaaattgaag gtgtttatgc ccgagatgaa actgagttct
      181 acttaggcaa gaggtgtgct tatgtgtaca aagcaaaaaa caatacagtg actcctggag
      241 gcaaaccaaa caaaaccaga gtgatctggg gaaaagtaac tcgggcccat ggaaacagtg
      301 gcatggttcg tgccaaattc cgaaggaacc ttcctgcaaa ggccattgga cacagaatcc
      361 gtgtgatgct gtacccatcc cggatttaaa ctaatggaga gtaaataaat aaaagtagat
      421 ttgtgctctt gtaaaaaaaa aaaaaaaaaa a
//
