LOCUS       XM_039094930             989 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus glyceraldehyde-3-phosphate
            dehydrogenase pseudogene (LOC108348437), mRNA.
ACCESSION   XM_039094930
VERSION     XM_039094930.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..989
                     /gene="LOC108348437"
                     /note="glyceraldehyde-3-phosphate dehydrogenase
                     pseudogene; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 110 Proteins, and 64% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:108348437"
                     /db_xref="RGD:11475248"
     CDS             90..989
                     /gene="LOC108348437"
                     /codon_start=1
                     /product="glyceraldehyde-3-phosphate dehydrogenase-like"
                     /protein_id="XP_038950858.1"
                     /db_xref="GeneID:108348437"
                     /db_xref="RGD:11475248"
                     /translation="MVKIGVNGFGRIGRLVTRAAFSSDKVQIVAINDPFIDLNYMVYM
                     FQYDSTHGELNGTVKAENGKPIAIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGT
                     HLKGGAKRVIISTPSADAPMFVMGVNHEKYDKSLKIVSNTSCTTNCLAPLAKVIHDNF
                     GIVEGLMTTVHAITAPQKTVDGPSGKLWHDGRGAAQNIIPASTGAAKAVGKVIPELNG
                     KLTGMAFCVPTPHVSIMDLTCCLEKPAKYDDIKKVVKQASEGPLKGILGYTEDQVVSC
                     DFNSNSHSSTFDAGAGIALNDNF"
ORIGIN      
        1 aataaacttg tgatccggct ctctgctcct ccctgttcca gagacagccg catcttctcg
       61 tgcagtgcca gcctcgtctc atagacaaga tggtgaagat cggtgtaaat ggatttggcc
      121 gtattgggcg cctggttacc agggctgcct tctcttctga caaagtgcag attgttgcca
      181 tcaacgaccc cttcattgac ctcaactata tggtctacat gttccagtat gactctaccc
      241 atggcgagct caacggcaca gtcaaggctg agaatgggaa gcccatcgcc atcttccagg
      301 aacgagatcc tgctaacatc aaatggggtg acgctggtgc tgagtatgtc gttgagtcta
      361 ctggtgtctt caccaccatg gagaaggctg ggactcacct gaagggtggg gccaaaaggg
      421 tcatcatctc caccccttcc gctgatgccc ccatgtttgt gatgggtgtg aaccatgaga
      481 aatatgacaa gtccctcaaa attgtcagca atacatcctg caccaccaac tgcttagccc
      541 ccctggccaa ggtcatccat gacaactttg gcatcgtgga agggctcatg accacagtcc
      601 atgccatcac tgcccctcag aagactgtgg atggcccctc tggaaagctg tggcacgatg
      661 gccgtggggc agcccagaac atcatccctg catccactgg tgctgccaag gctgtgggca
      721 aggtcatccc agagctgaac gggaagctca ctggcatggc cttctgtgtt cctacccccc
      781 atgtatccat tatggatctg acatgctgcc tggagaaacc tgccaagtat gatgacatca
      841 agaaggtggt gaagcaggcg tccgagggcc cactaaaggg catcctgggc tacactgagg
      901 accaggttgt ctcctgcgac ttcaacagca actcccactc ttccaccttt gatgctgggg
      961 ctggcattgc tctcaatgac aacttttaa
//
