LOCUS       XM_039098100            1234 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC108348337
            (LOC108348337), transcript variant X2, mRNA.
ACCESSION   XM_039098100
VERSION     XM_039098100.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039098100.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1234
                     /gene="LOC108348337"
                     /note="uncharacterized LOC108348337; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     and 96% coverage of the annotated genomic feature by
                     RNAseq alignments, including 8 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:108348337"
                     /db_xref="RGD:11447015"
     CDS             123..785
                     /gene="LOC108348337"
                     /codon_start=1
                     /product="disks large homolog 5-like isoform X1"
                     /protein_id="XP_038954028.1"
                     /db_xref="GeneID:108348337"
                     /db_xref="RGD:11447015"
                     /translation="MFSCLRKRFGRGNVDCGETRVKESGLSSLSNDGQRQHFWGMWNA
                     GRETSSPETALSEKQAKKEKERLIKELQLITKERNDLRYRLRFLTERSKNNRPHFRPN
                     PYYEDLERMEEVVMSILHNLEMENTEIHENSHKLKKEITFSRNLLSQLLMENTCRKKL
                     VPQMQGSKEGHLDCALNQKYLVDFNKKDKDQQRPDPASSGLRKCKRAGIGHTPVRELP
                     EE"
ORIGIN      
        1 cttcttggac attctattgt ctcctagaga gttctggcat cctctgtgat gtcaccagtg
       61 ttgtagtgac aaccagtgcc ctagtttctc tcagtctgag tctggcagtt acaagctaag
      121 acatgttttc ctgtcttcgc aagcgttttg ggagggggaa cgtcgattgt ggagagacta
      181 gagtgaagga gtctggcctt tcgtctctaa gtaatgatgg acaaagacag cacttctggg
      241 gaatgtggaa cgctgggaga gaaacatctt cccctgaaac tgccctaagc gagaagcagg
      301 ccaagaagga aaaggagagg ctgattaaag agctgcagct cattaccaag gagagaaatg
      361 acctgagata tcgcctgagg tttctgacag agagatccaa gaacaacagg ccacacttca
      421 ggccaaatcc gtattacgaa gacctggaga gaatggagga ggtggtcatg tcaattctgc
      481 acaacttaga gatggagaac actgagatcc atgagaacag ccataagctg aagaaggaga
      541 ttaccttctc tagaaacctg ctcagccagc tcctgatgga gaacacatgt aggaagaagt
      601 tggtcccaca gatgcagggg agcaaggagg gacatcttga ttgtgcactg aaccagaaat
      661 atttggttga cttcaacaag aaagataaag accagcaacg tccagatcca gcatcatcag
      721 gtctcagaaa gtgcaagaga gctggaattg gacacacacc agtaagagag ctccctgagg
      781 aataagttgc tttctcagga gtccctgatg acaaacatcc tgaacggtaa caacattttt
      841 tggatgagta ttcttcctca gagttaattt gtcatttctt agagacccta aatttatata
      901 acactaagcc agcctgactg attgaggtct tactcacttt cttcttcaga aaacaccact
      961 tgagagacaa cttgggggac cgcctttcat tatgtgtgct agaggagaaa cagcaataca
     1021 tctgtgcttc taaatgtttg ttaaaaatat gctgtttaga aatatttttg ttatgatttt
     1081 aattgaagtt ttctttttgt tgtttcatat ttatatgttc ttgttactgt ttttcacttt
     1141 ccaatatgtt taaatatttt tattcattca ttttaatcct gttttgttgt aaaaatgtat
     1201 tcattatgaa taaatattga tttttatctc ttga
//
